Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2246 |
Symbol | |
ID | 3624746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 2854024 |
End bp | 2855019 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637701118 |
Product | hypothetical protein |
Protein accession | YP_305751 |
Protein GI | 73669736 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000215357 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACAGCT GGGAAGAAAA ACTCTTCAAA GAATTCATCC TCTCCCCTGG TCAACACGGC CTAGAAAACG GAAATACAGG ATCAGGAAAA ACTACCCTCA TGTTCTGGCT CGTAGACGGC TTCCTGCAGG CAAGAAACAA GCTTCCAGCC AGCCAGTGGG AAACCTTAGT CTGGTTTGAC AGAGGCAAAA GCTCAGAAAT CCTGCAGCTC TCCAGAATGG CCCCTGTTAG ACTCCTAATC CCTGAATCAT GTAATATAGA AATAAACTTC TTCGAAGACG AAAACGGCGA AGAAGTCCAA CACTACGAAA TAGAAAAAAT ATACTTCCAG GATCCCAAAG AAGTCTGGAA CCTCCTAGAC CGTGACCACA TAAACGTCCT ATGTCTCCAG CGTTTCATAC TTCACCCTTC CCTAGTAGCT CCCACCACAG CCAAGCTCTT TGAATCCCTA ATCCTAAAAG CAATGAACTA CGACCTAAAA CCTGCAGGAT ACACCTACTC ACAGCTAAAA GGCAAAAACC CCAGAGTAGC AATCTTTCTA GACGAACTCA ACAACATAGC ACCCAGCCGA GGACAAGGAT TCTCAGGAGA CCAGCAAGCA GGCGCAATCC TCCAGCACAA CGCCGAACAG CTAAGAAGTC AAAACGTCCG ACTCGTCGCA TCTTCCCACG GCTGGCGCAA ACTTCGCCCA GGGATAAGGT CCTCCTTCCA GTTCCTAATC TCCCTCAGAG GCGCAAACTA CCCCAGCAGC GAACAGCCTA AACTATACCG CTTCAATCGC CTCTTTGAAA AGCTCGAACC CGGACAAGCA ATAATCTCCT TCCCTTCCAA AACCTTCACC GACAAAATAA GAATCCCCTG GTATGGAAAA GGTGAAGATC TCGGTTACAT CCGGTACATA GGCCACCTGG AACCCGAACA TAAACCCAGA ACCCAGAAAT CAAGCATAGG CCTCGAAGAC CTTGTAACCG CCCTAAAAGC CGTAGTCTCC CAATAA
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Protein sequence | MNSWEEKLFK EFILSPGQHG LENGNTGSGK TTLMFWLVDG FLQARNKLPA SQWETLVWFD RGKSSEILQL SRMAPVRLLI PESCNIEINF FEDENGEEVQ HYEIEKIYFQ DPKEVWNLLD RDHINVLCLQ RFILHPSLVA PTTAKLFESL ILKAMNYDLK PAGYTYSQLK GKNPRVAIFL DELNNIAPSR GQGFSGDQQA GAILQHNAEQ LRSQNVRLVA SSHGWRKLRP GIRSSFQFLI SLRGANYPSS EQPKLYRFNR LFEKLEPGQA IISFPSKTFT DKIRIPWYGK GEDLGYIRYI GHLEPEHKPR TQKSSIGLED LVTALKAVVS Q
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