| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2220 |
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| Symbol | |
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| ID | 3624682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 2817888 |
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| End bp | 2818859 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637701093 |
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| Product | glycerate dehydrogenase |
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| Protein accession | YP_305726 |
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| Protein GI | 73669711 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.289915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00653972 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAAATAG TTGTTTCAGA TTCCATATTC CTGCCAGAGG AATATAGAAA AAAGCTTGAT
GCTCTTGGAG ACCTTAAAGT CTTTGAAAGC ATGCCTTCTT CAATTGAAGA ATTTATCTCA
AGGGTAAGGG ATGCAGATAT AGTTCTTGTA GGTAGATATG GCTTTTCGGG AAAAGCGTTC
AATGCCTCCC GAAATTTGCA GATGCTTTCC GTATGGCAAA CCGGCTATGA TCATATAGAT
CTCAAAGCTG CAACTGAAAA AGGTGTAATT GTGTCCAATG TCCCTGACTA CGCGTTTGAT
TCGGTTGCTG AAATGGTTTT TGCCCTGGCC CTAAATCTCC TGAGAAAAGT GCATGTCGCA
GACATCAGGC TTCGAGAAGG GAATTTTGAC TGGCGACACT ATTTTGGGAG TCAGATCATG
GGAAAAACAA TGGGGGTAAT AGGTACCGGT AGTATAGGAT CAAGAGTTAT CCAGATAGCG
CACGGTTTTA ACATGAACGT TATTTCGGTT ACAGGTCATC CGAGTGAAGA AAAAGCAAGA
AGCCTTGGAG TAAAATTTGT CGACCTGGAT ACTCTGCTTG CAGAGGCTGA TATTGTTACA
CTTCATGTGC CTCTAACTCC TTCCACGGAA AAAATGATAG GAGCAAAAGA ACTTGCAAAA
ATGAAAAAAA GTGCAATCCT GATAAATACT GCCAGAGGGA AGGTGGTTGA TGAAGCTGCT
CTCATAGAAG CCCTCAAAGA GAAAAAAATC CGTGGAGCCG GTCTTGATGT TTTTGAAAAA
GAACCACTGC CGGCAAACGA TCCTCTGAAA GCGCTGGAAA ATGTCGTACT CACGCCTCAC
ATAGCTTTCC TTACGGAAGA ATCTCTCGAG GAATGCACAT ATGTCTGCGT TCAAAACGTA
GAAAGATTTA TTGAAGGAAA ACCTCAGAAC ATTGTAAACC CCGAAGTGCT TACAATCCTC
AGGTTGCCTT AA
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| Protein sequence | MKIVVSDSIF LPEEYRKKLD ALGDLKVFES MPSSIEEFIS RVRDADIVLV GRYGFSGKAF
NASRNLQMLS VWQTGYDHID LKAATEKGVI VSNVPDYAFD SVAEMVFALA LNLLRKVHVA
DIRLREGNFD WRHYFGSQIM GKTMGVIGTG SIGSRVIQIA HGFNMNVISV TGHPSEEKAR
SLGVKFVDLD TLLAEADIVT LHVPLTPSTE KMIGAKELAK MKKSAILINT ARGKVVDEAA
LIEALKEKKI RGAGLDVFEK EPLPANDPLK ALENVVLTPH IAFLTEESLE ECTYVCVQNV
ERFIEGKPQN IVNPEVLTIL RLP
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