Gene Mbar_A2198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2198 
Symbol 
ID3626074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2788228 
End bp2790471 
Gene Length2244 bp 
Protein Length747 aa 
Translation table11 
GC content40% 
IMG OID637701072 
Producthypothetical protein 
Protein accessionYP_305705 
Protein GI73669690 
COG category[R] General function prediction only 
COG ID[COG3291] FOG: PKD repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0450097 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.656514 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTACAT ACGTTCCTGT TGCTTTGTGC ATGACACCAC CAGTTGTTTA CGTTGCTGGA 
AATGAGAGTG GTGATTTTAA CTGCTCTGGA GAAAATGATC ACATCACAAT TAACCAGGCC
CTTAAATTTG TTACCGAAAA CCCTAGTTAC ACAACTGTTT ATCTCAAGGG GCCTTTCACA
TATGTTATAG ACGATACTCT TCAGATTGGC AGCAATACAA TCCTTGAAGG AGATTCCAAT
GCAACAATAA AATTAGTACG AAATGCTGGA TGGTCATCTA CTAAACCTTT GATTAAAGAA
AGTAACTCCA GTAGCCATAA CATTACTATT CGCGGTTTTA CCATTGATGG AGACAGGGAA
GGAAATGCCA ATATAGAAAG CGGAAATGGT TACCATAATC TTATCCACTT CAGTGATTGT
CAGAACGTAA GTGTATACAA TATGTATCTG ACCAATAACC ACGGAGATGG CTTAAAGACT
GACAACTGTT CTAATATAAT ATTCTGTAAT AATGAGGTAT ACTTATTAGG GCATGATGTT
CTCTATGCCA GTACCTCTTC AAACGTGAAA GCTTACAATA ACAGGATTAC CTGCAGGACA
AACAGCGGCC TGAGATTATA TAATACAAAT CATGCGAAGT TCTACGATAA TAAAATTACA
TCAGAGGGGT CTGGCGGGGT AGGAATTGAA ATCCAGAGAG ATGGAGCATC TATGGATGAT
ATTGAGGTGT ACAATAACAC AATATATGAG ACTGCACTTG CAGGCATCTG GTTTTTCTCA
CAGGGATCAA ATTCCAAATC GTCTGCAAAT GTCCACATTC ACCATAATCA GATCTATGAT
ACCGGAACAG TTTCAGGCAA CAAAGTAATA GGCGGAATCT TATCCGTCGG ATTTAATGCT
ACCATTGAAA ATAACGTGAT AGATGGCGCA CACGGGGCTG GTATTGTGCA GAATGCTGCT
TTTTTCTCAG CTCCGGCTGG TTCAGGGTAT GTAGTTACAG TAAGAAATAA CATAATAACG
AACACTCGCA CATCAGCAGT TGGAGGAAAT GGATCTGGAA TATGTAACAT GCTTACAGAC
ACCCACGCTT TTATCCTGCA GAATAATTCT TTATATAACA ACGCTGGTGG GAACTATATA
GGTGTTCAGG CGCCACTTTT GGATATAATA GCGGATCCTC AATACGTGGA CAGGGATAAA
CACGACTATC ACCTGAAGTC AAAAACAGGA CGCTGGAATG GGAGTTGTTG GGTGAATGAC
AATATAACTT CCCCATGTAT CGATGCCGGA TATCCTTTCT CTGACTATTC CAACGAACCA
GAACCCAATG GAAATAGAAT AAACATAGGT ATGGACGGAA ATACCTGGTA CGCCTCAAAA
TCCGAATTTG AGGTGTTAAA CAATAGTAGC GACAATAGCA GTAGCAATGA GGACAGTGAT
GACAGTGATG GTAGCAGAGG TAGCAAGGGT AGCAGAAGCA GCAGTGGCGG TAGTGGAGGC
AGTGGCAGTA GCGGTGGCTC TCCCGAGCCT GCAAAAAACG TTGAAGTAAA AGAACTTTCG
CAGGTGTTTA TTACAAATGG AAAATCTGTA AAATTTGATT TCGTAAATAA TGCAACCTGC
GTTGTTTATG TGGATTTTGA CGCAAAAAAG ACAGTAGGTA AGACAACAAC CATTGTAGAG
ATGCTGAAAA ATAAATCCGT TCTGGTTTCA GACCTGCCTT CGGATGAAGT CTATAAATTC
TTTAATCTCT GGGTTGGAAA CGGTGGATAT GGAAACTCGA AGAATATAGA AAATCCGGTT
GTATGTTTCA AAGTTGAAAA ATCCTGGATT GAGGATAACA ATATCGGCCA GGCTTCAATA
ACCCTGAACA GGTACAATGA TACAAAATGG GACTCGCTTT CAACCAGCCT GTCAGGGGAA
GATGACACGT ACTTGTATTT CATAACCGAA ACTCCTGGAT TCTCTCCCTT CGTAATAACG
GGTAAGACAA CAGGTAAGAC GACAGAAAAT AAAATTTTGG CTGAACTCCC GCCAGAACCT
GACACTCAGA CTCTTAAACA AAGTAGTGGA TATACAGGAT CAGATATTAA AAAGAAGACT
GAGTATACAG GAAACGTACA AGCAGAGAAT AAAAAAACAG GAAACACAAG TACATATTGG
AAAGAAAATG TGAGCCTGCC TGGATTTGAA ATCATTTCTG GCATTGTCTG CCTGCTTGGC
GTACTCTTGT ATAGAAGAAA ATAA
 
Protein sequence
MLTYVPVALC MTPPVVYVAG NESGDFNCSG ENDHITINQA LKFVTENPSY TTVYLKGPFT 
YVIDDTLQIG SNTILEGDSN ATIKLVRNAG WSSTKPLIKE SNSSSHNITI RGFTIDGDRE
GNANIESGNG YHNLIHFSDC QNVSVYNMYL TNNHGDGLKT DNCSNIIFCN NEVYLLGHDV
LYASTSSNVK AYNNRITCRT NSGLRLYNTN HAKFYDNKIT SEGSGGVGIE IQRDGASMDD
IEVYNNTIYE TALAGIWFFS QGSNSKSSAN VHIHHNQIYD TGTVSGNKVI GGILSVGFNA
TIENNVIDGA HGAGIVQNAA FFSAPAGSGY VVTVRNNIIT NTRTSAVGGN GSGICNMLTD
THAFILQNNS LYNNAGGNYI GVQAPLLDII ADPQYVDRDK HDYHLKSKTG RWNGSCWVND
NITSPCIDAG YPFSDYSNEP EPNGNRINIG MDGNTWYASK SEFEVLNNSS DNSSSNEDSD
DSDGSRGSKG SRSSSGGSGG SGSSGGSPEP AKNVEVKELS QVFITNGKSV KFDFVNNATC
VVYVDFDAKK TVGKTTTIVE MLKNKSVLVS DLPSDEVYKF FNLWVGNGGY GNSKNIENPV
VCFKVEKSWI EDNNIGQASI TLNRYNDTKW DSLSTSLSGE DDTYLYFITE TPGFSPFVIT
GKTTGKTTEN KILAELPPEP DTQTLKQSSG YTGSDIKKKT EYTGNVQAEN KKTGNTSTYW
KENVSLPGFE IISGIVCLLG VLLYRRK