| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2179 |
|---|
| Symbol | |
|---|
| ID | 3626036 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 2757512 |
|---|
| End bp | 2758693 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637701054 |
|---|
| Product | flavodoxin |
|---|
| Protein accession | YP_305687 |
|---|
| Protein GI | 73669672 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0426] Uncharacterized flavoproteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.438585 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.181254 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATCT ACAGTGTTCC TGAAATTGCT AAAGATGTAT TCTGGGTTGG GGCAAAAGAC
TGGAGCCGCA GAATGTTTGA TGCTCTAGTT CCGCTGCCTC AGGGGACAAG CTACAACGCG
TATCTTGTGA AAGGAGAAGA AAAAACAGCA CTTATTGATA CCGTGAACCC TGGTTTCGAA
GAGGAGTTCG AAGAGAAAAT AAATCTGGTT TCCAGCCTGG AAAAACTGGA CTACCTGATT
ATGAATCATG CCGAACCCGA CCACGCCAGT GCAATTCGTT ATATTATGGA TCGGGCTCCT
GGCTCGGTGC TTGTTACCAC GGAAAGAGGC GTGAAAATGG CAAGCCTTTA CCATGACCTG
CCAGACGATC GGATTAAAGT CGTTGCCGAT GGAGATACTA TTGATTTGGG AGGAAAAAAT
CTGCACTTTA TTGAGGCTCC CTGGCTCCAC TGGCCTGAAA CCATGTTCAC ATACCTACCT
GAAGGCAGGG TCCTTTTCCC ATGTGATTTC TTTGGGGCTC ATACGGCCCA GGGCGTTTAT
GATGAGGACC TAGAAGACCT TATTCCTCTT GCAAAAAGCT ATTATGGGGA AATCATGATG
CCTTTTGGAA AAATGGGAGC AAAGGCCCTT GAAAAAATTA AGGATCTGGA TATCGCAGTT
ATTGCTCCGA GTCACGGGCC TATTTATAAA AACCCTCAGC GTATACTTGA GCCCTACGCA
AAATGGACTG CAGGAAAGAC CGAAAATAAA GCCCTTATTG TCTATGTGAG TATGTGGGGC
TCCACAAAAC TAATGGTTAG AACAATCGCA GAAACCTTAC TGAAAGAAGG TGTAGATGTC
AGAATCTATG ACCTTGAAGT TGCGAATACA GGAGATATTG CAAGAGAACT GGTTGATTCC
CGCGCTGTTA TCCTTGGAAC TCCAACCGTC CTTGCAGGCA TGCATCCTCT TGCCCTTTAC
GGCACTTACC TAGTAAAAGC TCTCAAGCCG CCTGCAAAAT ATGGGGTTAT ACTTGGATCT
TTCGGCTGGG GTGGAGGCGC TCTGAAGCAA GCAGGAGAAA TTCTGGTTCC CTCAAAGATG
GAAATTGTTG GAACGCTTCA GGTAAAGGGC AAACCCAGAG AAGAAGATTT GAATAAAATT
GAGGGAATCG GCCGAGAACT CGCCAGGAAA ATGAAAGCAT AA
|
|---|
| Protein sequence | MDIYSVPEIA KDVFWVGAKD WSRRMFDALV PLPQGTSYNA YLVKGEEKTA LIDTVNPGFE
EEFEEKINLV SSLEKLDYLI MNHAEPDHAS AIRYIMDRAP GSVLVTTERG VKMASLYHDL
PDDRIKVVAD GDTIDLGGKN LHFIEAPWLH WPETMFTYLP EGRVLFPCDF FGAHTAQGVY
DEDLEDLIPL AKSYYGEIMM PFGKMGAKAL EKIKDLDIAV IAPSHGPIYK NPQRILEPYA
KWTAGKTENK ALIVYVSMWG STKLMVRTIA ETLLKEGVDV RIYDLEVANT GDIARELVDS
RAVILGTPTV LAGMHPLALY GTYLVKALKP PAKYGVILGS FGWGGGALKQ AGEILVPSKM
EIVGTLQVKG KPREEDLNKI EGIGRELARK MKA
|
|---|
| |