Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2177 |
Symbol | |
ID | 3626034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 2754230 |
End bp | 2755402 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637701052 |
Product | ornithine decarboxylase |
Protein accession | YP_305685 |
Protein GI | 73669670 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.024937 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.209204 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAAAG AGCACTATGT GTTTCCGCTG GAGGATTTCG TTTCAAGAGA TGATTTTAAC CGAATCAAAA AGTTCTCTCG TGGTAAAGAA ACTCCATTTT TAACTGTTGA CCTGCAGAAG ATAGAGCAAA GCTATGACGA ACTTGTAGAG CACATGCCCT TTGCAAAAAT TCACTATGCT GTAAAGGCTA ACCCCATGGA TGAGGTTGTG CTTGCCCTGA AGAGTAAAGG CTCCAATTTT GATGTAGCAA CGGTTTATGA ACTTGATCAG CTTCTCAGGC TTGGGGTAGA ACCTGAAAGG ATCAGTTACG GCAATACTAT CAAAAAAGAG AAAGATATAG AGTACGCGTA TGAAAAAGGA GTGAGGCTTT ACGTTACTGA TTCTGACAGC GATCTGAAAA AGTTAGCTAG AAAAGCACCG GGTTCAAGAG TATTTTTCCG TATCCTTACT GAAAGCGATG GGGCTGACTG GCCTCTCTCA AAGAAGTTCG GTTCGCACCC TGACCTGATA TATAAGCTAA TTCTTAAGGC TGAAAAGCTG GGGCTTGAGC CTTATGGGCT TTCTTTTCAT GTTGGTTCCC AGCAGAGGGA TATTGGTCAG TGGGACAATG CTATTTCCAA ATGTAAGTAT CTTTTTGAGG CAGCAGCTGA AAAAGGTATA CATCTGAAAA TGATCAACCT TGGTGGAGGC TTTCCTGCAA AATACCAGGC TCAGGCTCAT GACCTTGAGA CTTATGCTGG AGAAATCCGC CGCTTTTTAC ATGAGGACTT TGGAGAAGAG CTACCTGAAA TTATTATAGA ACCCGGACGT TCCCTGGTTG CCAATGCCGG CATAATAGTA AGCGAAGTTG TAATGATTTC CAAAAAAGCC AGATTCAACC AGTACAAATG GGTTTATCTT GACATTGGCA AATTCGGGGG CCTTATAGAA ACCCTTGATG AGTGCATTAA ATACCCTATT TTCTGTGATA AAAAGGGTTG TGCCGAAGAA GTAATTCTTG CAGGCCCGAC CTGTGACAGC ATGGACATCC TGTATGAGCA TCACAAGTAT ACATTTCCTC ACACAATGCG CGAGGGAAAC CGTGTATATA TCTTTACGGC AGGCGCCTAT ACCCAGAGCT ACAGTTCCGT GTGTTTTAAC GGTTTCCCCC CACTAAAGGC TTATCTCATT TGA
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Protein sequence | MRKEHYVFPL EDFVSRDDFN RIKKFSRGKE TPFLTVDLQK IEQSYDELVE HMPFAKIHYA VKANPMDEVV LALKSKGSNF DVATVYELDQ LLRLGVEPER ISYGNTIKKE KDIEYAYEKG VRLYVTDSDS DLKKLARKAP GSRVFFRILT ESDGADWPLS KKFGSHPDLI YKLILKAEKL GLEPYGLSFH VGSQQRDIGQ WDNAISKCKY LFEAAAEKGI HLKMINLGGG FPAKYQAQAH DLETYAGEIR RFLHEDFGEE LPEIIIEPGR SLVANAGIIV SEVVMISKKA RFNQYKWVYL DIGKFGGLIE TLDECIKYPI FCDKKGCAEE VILAGPTCDS MDILYEHHKY TFPHTMREGN RVYIFTAGAY TQSYSSVCFN GFPPLKAYLI
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