Gene Mbar_A2175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2175 
Symbol 
ID3626032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2750853 
End bp2752298 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content48% 
IMG OID637701050 
Productketoisovalerate ferredoxin oxidoreductase, gamma subunit 
Protein accessionYP_305683 
Protein GI73669668 
COG category[C] Energy production and conversion 
COG ID[COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit
[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.320892 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCAG AAATAATTAA TGGAGAAAAA GTAATAGGAA GACCAAAAGC CCTGTACGCG 
GATTACCCTC GCAAAGGACC AGTAGCCTCT ACAGCCACTC ACTACTGCCC CGGCTGCGGA
CATGGTGTTC TTCATAAGCT TATTGCCGAA GCAATCGACG ATCTTGGGAT TCAGGACAGG
ACTGTTATGA TCAGTCCTGT TGGCTGTGCT GTCTTTGCTT ACTATTATTT TGATACAGGT
AACATCCAGG TCGCTCACGG CCGTGCGCCT GCGGTTGGGA CCGGAGTATC CAGGGCTGAA
GAAAATGCTG TGGTTATTTC TTATCAAGGA GATGGAGACC TTGCATCCAT TGGTCTGAAC
GAGACTCTCC AGGCTGCAAA CAGGGGTGAA AAGCTTGCAG TTTTTTTCGT AAACAATACC
GTTTACGGGA TGACAGGCGG ACAGATGGCG CCTACAACCC TTGTGGGCGA AAAGACCACA
ACATGCCCTG AAGGCCGAGA CCCCCGTTTT GCAGGTTATC CTCTCCACAT ATGCGAACTG
CTGAACAACC TTAAGGCTCC AGTCTTTATT GAAAGGGTTT CAATTTCGGA TATTTCTCAC
ATAAGGAAAG CCAGAAAAGC TGTGCATAAG GCACTCGAAA TCCAGCGTGA TGGAAAGGGC
TATGCTTTTG TTGAAGTCCT TGCCGCTTGC CCGACCAACC TCAAGATGAA TGCGGAGCAG
GCTATCAATT TCATAAATGA GGAGATGGAA AAGGAGTTTC CTGTCAAGAA CTTCAGGGAT
AACTCAAAAG AAGTTGAACC TCTGCACCGT GGAGTCAGTG ACTTTACAAC CAAAGCCATT
GAACAGCTTT ATGGCATTGA GGCAGAAGCC GAAGAAAAAC CCGCCAGAAA AGACTTTGCT
CCTATTCAGA CCAAGATTGC TGGTTTCGGA GGGCAGGGTG TCCTCAGCAT GGGATTAATC
CTTGCGCAGG CCGGAGTTAA GGCAAATCTC AACGCTTCCT GGTTCCCGTC CTATGGCCCT
GAACAGAGAG GAGGCACCTC TAACTGCTCA GTCGTGATTT CAGGTCAACC TATAGGCTCT
CCTACGGTCT ACACTCCGGA CATCCTGATA GCTATGAATC GTCCTTCCCT TGAAAAGTTT
GAAGGGGTAG TCCGAGAAGG AGGCCTTATA CTTTACGACT CGTCCATTGG CGAAGCTGAA
ACGCCTGCAA ATATAAAGGC TGTTGCCGTT CCTGCAACCG AGAAAGCAAA AGAAGCCGGT
TCTGAGAAAG CTGCCAATTC CTTCATGCTT GGAGTTCTTA TGGGCCTTGA TGCAACTAGC
CTGAAAGAGG AAGTCTTCAA AGAGGCTCTT GCTGAAAACT TCGCAGGGAA AACCAAAGTT
ATTGAGTTTA ACCAGATGGT TCTCGAAGCT GGGGCACAAT GGGCAAGAGA AAATGTTAAT
TTCTAA
 
Protein sequence
MAAEIINGEK VIGRPKALYA DYPRKGPVAS TATHYCPGCG HGVLHKLIAE AIDDLGIQDR 
TVMISPVGCA VFAYYYFDTG NIQVAHGRAP AVGTGVSRAE ENAVVISYQG DGDLASIGLN
ETLQAANRGE KLAVFFVNNT VYGMTGGQMA PTTLVGEKTT TCPEGRDPRF AGYPLHICEL
LNNLKAPVFI ERVSISDISH IRKARKAVHK ALEIQRDGKG YAFVEVLAAC PTNLKMNAEQ
AINFINEEME KEFPVKNFRD NSKEVEPLHR GVSDFTTKAI EQLYGIEAEA EEKPARKDFA
PIQTKIAGFG GQGVLSMGLI LAQAGVKANL NASWFPSYGP EQRGGTSNCS VVISGQPIGS
PTVYTPDILI AMNRPSLEKF EGVVREGGLI LYDSSIGEAE TPANIKAVAV PATEKAKEAG
SEKAANSFML GVLMGLDATS LKEEVFKEAL AENFAGKTKV IEFNQMVLEA GAQWARENVN
F