| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2174 |
|---|
| Symbol | |
|---|
| ID | 3626031 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 2749795 |
|---|
| End bp | 2750850 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637701049 |
|---|
| Product | 2-ketoisovalerate ferredoxin reductase |
|---|
| Protein accession | YP_305682 |
|---|
| Protein GI | 73669667 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.302844 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACAC AACTAGTAAA AGGCAACTCT GCAGTAATCA TCGGTGCACT ATATGCCGGA
TGTGACTGTT TCTTTGGTTA TCCGATAACT CCGGCAAGTG AGATTCTGCA TGACGCATCC
AAATATTTGC CAAAAATAGG CAGGAAATTC GTCCAGGCCG AATCTGAAGA GGCGGCTATT
AACATGGTTT ATGGAGGAGC ATCAGCAGGG CACAGGGTCA TGACATCATC TTCAGGCCCT
GGACTTAGCC TGATGCAGGA AGGAGTTTCC TACCTTGCTG GCTCTGAACT TCCCTGCGTG
ATTGTGGATA TTATGCGGGC AGGACCAGGC CTTGGAAATA TAGGGCCGGA GCAGGGGGAT
TATAACCAGA TAGTAAAAGG CGGAGGACAT GGAAACTACA AAAATATCGT GCTTGCTCCG
AACTCAGTGC AGGAAATGTG CGACTTTACC ATGAAAGCTT TTGAGCTTTC CTTTAAGTAC
AGAAACCCAG CTATAGTGCT TGCAGACGGA GTGCTCGGGC AGATGATAGA GTCACTTGAA
TTCCCGAAGC AAGCTATTGT TCCTGAGATT GATACCACTT GGGCGGTCAA TGGTACAGCC
GAAACCAGGC CTAACCTGAT AACCTCGATC TTTCTGGACT TCAATGAGCT TGGAAAGTTT
AATGAAAAAC TGCAGGTAAA GTATGAGCTC ATAAGGCAGA ATGAAGTCGA TTACGAAGAA
TATCTTACTG ATGATGCTTC AATTGTCCTT GTTTCTTATG GGATCAGCAG TCGGATTTGC
AGGTCAGCCG TGGATCTTGC CAGAAAGGAA GGCATTAAAG TTGGGCTTTT CAGGCCTAAA
ACCCTCTTCC CGTTCCCTGA GGCGCAGTTG AAGGCTCTGG CAGATAAGGG CTGTTCCTTT
ATTTCCGTGG AAATGAGCAA TGGACAGATG ATATATGATG TCAGGCTTGC AATCAACTGT
TCACAGCCTG TAGAGCTTGT AAATCGTATG GGAGGAAACC TGATGACCCT TGACCAGATT
ATGGATAAAA TCAGGAAAAT GGCAGGGGAG GCATGA
|
|---|
| Protein sequence | MATQLVKGNS AVIIGALYAG CDCFFGYPIT PASEILHDAS KYLPKIGRKF VQAESEEAAI
NMVYGGASAG HRVMTSSSGP GLSLMQEGVS YLAGSELPCV IVDIMRAGPG LGNIGPEQGD
YNQIVKGGGH GNYKNIVLAP NSVQEMCDFT MKAFELSFKY RNPAIVLADG VLGQMIESLE
FPKQAIVPEI DTTWAVNGTA ETRPNLITSI FLDFNELGKF NEKLQVKYEL IRQNEVDYEE
YLTDDASIVL VSYGISSRIC RSAVDLARKE GIKVGLFRPK TLFPFPEAQL KALADKGCSF
ISVEMSNGQM IYDVRLAINC SQPVELVNRM GGNLMTLDQI MDKIRKMAGE A
|
|---|
| |