Gene Mbar_A2136 details

Gene Information

• Locus tag: Mbar_A2136
• ID: 3626090
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanosarcina barkeri str. Fusaro
• Kingdom: Archaea
• Replicon accession: NC_007355
• Strand: +
• Start bp: 2694215
• End bp: 2697577
• Gene Length: 3363 bp
• Protein Length: 1120 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637701012
• Product: cell surface protein
• Protein accession: YP_305645
• Protein GI: 73669630
• COG category: [R] General function prediction only
• COG ID: [COG3291] FOG: PKD repeat

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.641314
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 13
• Fosmid unclonability p-value: 0.113779
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

TTGATATTGT TAACTCTGAT TCTGACCAGC GGGGTCTGCC TGGCTGACAA TTACGTAGGC 
GGAATCCCTC TGACTTCTGT CCACAACGGA ACAGTAAGTG GAGGTGTTTA TTGTGATAGC 
TACTACGGAA CAGCAGATCA GGCAATACAC ACCGATAAAA CTATAGACAA GACCTTTACA 
CTGCCTGATG ATGCTGAAGT TGAATGGGCG ACGTTGCTCA CAACCGTATA CTGTGGGCAC 
ATGCAAAATA ATTATAAAGG TTTTGCAAAT GTAAGCTTTA ACGACCAGAC TCTCGGAAAT 
GAAACCCTTA AAGTTCCTTA TAAATACATT ATTAATGGGG GTAATGACGG AAAAGCATAT 
GTCCAGGTAA ACGACCATGT TGACAGGGTA ACCAGTGACT ACATGATGTA TTATGATGTC 
ACAAGCCTTG TAAAGTCTGG GGAAAACAAA GCTACCGTAC ATACGGAGCC TACTGACGAG 
AAGTTTGATG GTAGAATAAA ACTGATAACT CTTATTGTAG CTTACAATGA CGGTAGCGGA 
AAAAAGATCT GGTATCAGGT AAACCGTGGA CACGATGCGG ATACTTATTA TAGTGAGGAT 
AACCTGGGTG AAAACTACAT CGGAAGCACA GATTTTAAGG CAGCTTTATC AGCGGGTTCT 
ACACTAAAAT CTGCAAAGCT TACAGATATA CACATGGCAA GTGCAGACGG GTCATACGCT 
TTCAACGGAA AATCACTCAC TTCAGGTACA CCCCAGGGTA CTTATTGTGG ATCTGATTCT 
TGGGATATTA CGGACGATTT TAAATCTACC GATACAAACA CTCTGACCTA TGACAGAAAT 
GCTGGATTCT ATAAAAATGC ACTTTCCATA CTGACGGCAG AATATACTGA CTCACAGGGG 
TTGGCACCAA TAGCCAACTT CACGGCGGAC AAGACAAGTG GAATGAAACC TCTAACAGTT 
GCGTTCATGG ATCAGTCAAC AGGTGAACCT ACATCCTGGA CGTGGGACTT TGGGGACGGT 
GCAAAGGCTA CAGAGCAGAA CCCTTCGTAT ACCTATGATT CTGTCGGGAA CTATAATGTC 
ACCCTCACGG TCACAAATGA AGCCGGTAGC AACAGCACAG TAAAGACGGA TTATATCACT 
GTAAGTTCGG CGGAAACTAA CGATCTCACG ATCTCCGGAA TCATAAACAC TGTACCAGGC 
TCTGCGGTCT TTGCCAGGGA AGCAAATACC ATAGTCACTA ACGTCAAGAA TACTGGCCCT 
GTTACCCTAA ATAATATTTC GGTAGCTCTT TATGCCAGCG ACGTATCCAG TTCAGTTCCA 
GTAAACACTA CAACAATTGC ATCCATGTCC AGTGGAGGAA CGGAAACTGC GACCATAATC 
GACCCAACCG TACGCAATCT GGAAGGTAGC ACTGTAACCT ATACTGCAGT TGTTGACCCT 
GACAATCTGA TCTCCGAAAC TAATGAGACT AACAACAACA AAAGCAGTTT GGCTAAATCT 
GTCAAATATA ATGGGTATAA AGGAAAACGC TACTGGAAAG GTGGAAGTGA TATTACCACA 
AAAGAGACCT ATGATCTCCA GGGTAACCTT CTGTACTCCA CACAACCCGA TACTTTTTAC 
AAAGCTATTG GCTGGACTGG CAGGACCGAA ACCTGGACTG CAAGTGATCT TCCACTCCCT 
AGTGGCTCCA CCGTAGAAAA GGTCTGGCTC TATCTCGCCT ACAACTGGGA TACCACTTCT 
GGGGGAGTAC CTAGCTGGAA TGCTTCGTTT AACGGAAAGC AGCTTACAGG TGGAACACCA 
TACACTGACA AGAGCAATTT TGGTGGGTAT GCTGAGTATA AATATGGCCT TTATGCCTTT 
GATGTGACCA GCCAGTTTAA CTCTGCAGGA AACAGTCTTG TCATGGCGCC TAATGCTGGC 
AATAGCAATG CTCTATACCC CAGCACTCTT GTTGTGATCT ACCGTAACCC TAATGAAACC 
AGGAAGCAGA TCTTCATCAA TGAAGAATGC GACGAACTTG GTGTATCTGC CTCCGGGTAT 
GGAACCACTT CCGAAGAAGC TACAGCATAT GCTCCTTTCA CGGGTATGTC CGTTGATGTA 
AGTAAGGTTA GGAACGCTAC GCTGTACAGT TTCGCAGGAA GTGCCGGACC CGATGAAGGT 
AACCTGCTCT TCAATGGAAA CACTGTGACA ACCCTGGCAT GGCAGGGAAG TTCAAATTCA 
GCAAGCCCTC TGGTCTTTAA TGTAAAAAAT TACATTAATG AAACCGGAAA CGAGGCCGGA 
ATCCAGGGCA CAACAAACGG AGGCATGGAT GCGCTCCAGC AGATCCTTGT CGTTGAATAC 
CAGAAAGAAC AAGAAGCTGC ACCAGTAGCT AACTTTACCA CAAATGTAAC AACCGGTACA 
GCACCTCTTG AAGTTCAGTT TACAGACGCT TCAACTGGCA CTGTTTCTTC CTATTCTTGG 
GACTTTGATA ATGATGGCAA TGTAGACAGC ACTGAGCAGA ACCCTATCTA CACTTATGCT 
GCAGCCGGTA CTTACACTGT TAACCTTACG GTTTCCAACG AGGATGGAAG CGATTCTGAG 
GTAAAAACTG GGTACATTAA GGTCTCCAGT CCCTCTTCAG CAAAGCCTGT AGCTGCATTT 
TCTGCGTCTC CTACTTCAGG AAAAACACCA TTAAAGGTTA AATTTACTGA TACAAGTACT 
GGCTCTCCAA CTTCCTGGTT CTGGAACTTT GGAGACGGAT CAAGTTCATT CGCTCAGAAT 
CCGACTCATA AGTATTCAAA AGCAGGGGAA TATACGGTTA ACTTGACAGT AAAGAATGCT 
AAAGGCAAGA ACACGGTAAC AAAAACAGAA TATATAAAAG TAATAACAAA ACCGGTTGCA 
AACTTTTCTG CAACTCCAAC CTCTGGAAAA ACACCATTGA ATGTTGCTTT TACTGACACA 
AGCACAGGAA TCCCTGCTAA ATGGAGATGG GACTTTGGAG ACGGATCAAA GTCATTCCAC 
CAGAATCCGA TTCATAAGTA TTCAAAAGCA GGAATATATA CTGTTAATTT AACAGTAAAG 
AATGCTAAAG GCAAGAACAC GGTAACAAAA ACAGAATATA TAATAGTGAT TACAAAACCG 
GTTGCAAACT TCACCAGTAG TGTTACATCG GGAAAAGCAC CATTAAAGGT TAAATTTACT 
GACACAAGCA CAGGAACACC TGCTAAATGG ATATGGGACT TTGGAGACGG ATCAGATTCA 
TTCCACCAGA ACCCGATTCA TAAGTATTCC AAGGCAGGAA CATATACGGT TAACTTGACA 
GTAAAGAATG CTAAAGGCAG TAACACGGTA ACAAAAACAG AATATATAAA AGTGACTGCA 
TAA 

 

Protein sequence

MILLTLILTS GVCLADNYVG GIPLTSVHNG TVSGGVYCDS YYGTADQAIH TDKTIDKTFT 
LPDDAEVEWA TLLTTVYCGH MQNNYKGFAN VSFNDQTLGN ETLKVPYKYI INGGNDGKAY 
VQVNDHVDRV TSDYMMYYDV TSLVKSGENK ATVHTEPTDE KFDGRIKLIT LIVAYNDGSG 
KKIWYQVNRG HDADTYYSED NLGENYIGST DFKAALSAGS TLKSAKLTDI HMASADGSYA 
FNGKSLTSGT PQGTYCGSDS WDITDDFKST DTNTLTYDRN AGFYKNALSI LTAEYTDSQG 
LAPIANFTAD KTSGMKPLTV AFMDQSTGEP TSWTWDFGDG AKATEQNPSY TYDSVGNYNV 
TLTVTNEAGS NSTVKTDYIT VSSAETNDLT ISGIINTVPG SAVFAREANT IVTNVKNTGP 
VTLNNISVAL YASDVSSSVP VNTTTIASMS SGGTETATII DPTVRNLEGS TVTYTAVVDP 
DNLISETNET NNNKSSLAKS VKYNGYKGKR YWKGGSDITT KETYDLQGNL LYSTQPDTFY 
KAIGWTGRTE TWTASDLPLP SGSTVEKVWL YLAYNWDTTS GGVPSWNASF NGKQLTGGTP 
YTDKSNFGGY AEYKYGLYAF DVTSQFNSAG NSLVMAPNAG NSNALYPSTL VVIYRNPNET 
RKQIFINEEC DELGVSASGY GTTSEEATAY APFTGMSVDV SKVRNATLYS FAGSAGPDEG 
NLLFNGNTVT TLAWQGSSNS ASPLVFNVKN YINETGNEAG IQGTTNGGMD ALQQILVVEY 
QKEQEAAPVA NFTTNVTTGT APLEVQFTDA STGTVSSYSW DFDNDGNVDS TEQNPIYTYA 
AAGTYTVNLT VSNEDGSDSE VKTGYIKVSS PSSAKPVAAF SASPTSGKTP LKVKFTDTST 
GSPTSWFWNF GDGSSSFAQN PTHKYSKAGE YTVNLTVKNA KGKNTVTKTE YIKVITKPVA 
NFSATPTSGK TPLNVAFTDT STGIPAKWRW DFGDGSKSFH QNPIHKYSKA GIYTVNLTVK 
NAKGKNTVTK TEYIIVITKP VANFTSSVTS GKAPLKVKFT DTSTGTPAKW IWDFGDGSDS 
FHQNPIHKYS KAGTYTVNLT VKNAKGSNTV TKTEYIKVTA