Gene Mbar_A2108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2108 
Symbol 
ID3627164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2663547 
End bp2664668 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content46% 
IMG OID637700985 
Producthypothetical protein 
Protein accessionYP_305619 
Protein GI73669604 
COG category[R] General function prediction only 
COG ID[COG3291] FOG: PKD repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGGC ATGAGTTAAA ATTTGTTGTT GTACTGTTCC TGGCCCTGAC TTTATTTACC 
TTCCCGGCTT CTGCAGGCAG TGCGGAAAGG ACTTTTCCTT CTTCGGTTAA TTCCGGTGAG
GAATTCAAGG TAACAGTCAA TGTATCTGAC TACGGTGCTG CCGGACAGGT GCTTGAAAAG
CTTCCTTCTG GCTTCACATT TGTTAGTTCT ACCCTGCCGA AAAGAGCTGT AACTGTGAAT
GGCAGCGAAG TTTCCTTCCT GCTTATGACT GAAAAGAGTT TCAGTTACAC TCTGAAAGCT
CCAGCAACAA CCGGTACATA CAAAATTGTG GGAATTTTGA GAGATATCAA CAAAGCTGAG
TTTTCTGTCC TTCCCGCCGA CTGTTCCATC ACTGTCAGTG GTGGCAGCTC AGGTGGTTCA
AGTGGCGGTT CAAGTGGTTC AAGTGGTGGA GGCGGCGGAG GCGGCGGTTC TGCTGAGCCT
CAGAGTAATG TTGAGTCCAA AGAACTGTCC AAGAAATCGG TCAAATCTGG GGAGCGCGTA
AGGTTCGAGT TTTCACAGGG TGCAACCTGC ATAAGGTATG TGGAGTTTGA TGCCAAAAAG
AGTATGGGAA AGATCACTAC TATTGTCGAA ATGCTGAAAG GACAGTCCAA ACTGGTTTCG
GGCCTGCCAG AAGGCACGAT TTATAAGAAC GTGAACATCT GGGTAGGTTC TGGAGGAATT
GCAAATTCCA ATAACATTGC AAACGCAGTT GTCGGCTTTA GAGTTGAAAA GTCCTGGCTC
GAGACATGCG GAGCTGACGA AACTTCTGTA GCTCTATGGA ACTATAATAA CAAAGCCTGG
AGCAAACTTG AAACCGCAAA AGTTGGTGAA GACAGCACCT ATGTCTTCTT TGAGTCCAAA
ACTCCGGGTT TCGGATCCTT CTCAATTGTA GTACCCGCTG AGAGTGTAGA ACTGAAACCT
TCAAAACCAG TAGACACCAC CACTCCATCC ACAGAAAAAG TTGAAACGAA CCCTGCAACT
AACGAAAACA AACCTTCTGG CTGGGGATCT ATCCCGGGAT TTGAGTCTGT AGTAGCTGCG
GGAATTCTTG GTGTTGTTTA CGGTATCCTG AGACGAAAGT AA
 
Protein sequence
MKRHELKFVV VLFLALTLFT FPASAGSAER TFPSSVNSGE EFKVTVNVSD YGAAGQVLEK 
LPSGFTFVSS TLPKRAVTVN GSEVSFLLMT EKSFSYTLKA PATTGTYKIV GILRDINKAE
FSVLPADCSI TVSGGSSGGS SGGSSGSSGG GGGGGGSAEP QSNVESKELS KKSVKSGERV
RFEFSQGATC IRYVEFDAKK SMGKITTIVE MLKGQSKLVS GLPEGTIYKN VNIWVGSGGI
ANSNNIANAV VGFRVEKSWL ETCGADETSV ALWNYNNKAW SKLETAKVGE DSTYVFFESK
TPGFGSFSIV VPAESVELKP SKPVDTTTPS TEKVETNPAT NENKPSGWGS IPGFESVVAA
GILGVVYGIL RRK