Gene Mbar_A2060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2060 
Symbol 
ID3626397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2604014 
End bp2604550 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content45% 
IMG OID637700938 
Productformaldehyde-activating enzyme 
Protein accessionYP_305574 
Protein GI73669559 
COG category[S] Function unknown 
COG ID[COG1795] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03126] formaldehyde-activating enzyme 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.189028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.41416 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTATAA AATACGCTGA GGTGTTAAAT CTGGTAAAAA ATATCCTAAA AAGTATGGTA 
GGAGAAGCTC TCATAGGCTC TGGTCCGGAA GTTGCACACA TAGACCTCGT TATTGGACCT
AGAGGAGGCT CAGTTGAAGC AGCGTTTATG AATTCGCTTG CAATGCCCAG ACAGGGTCAT
ACCCCACTTC TTGCAGTCCT GGAACCAAAT ATTCAGCCCA AACCTACGAC CTTGATCGTA
AATAAGGTAA CGATAAAAAA CGTATCGCAA GCTGCTCTTA TGTTCGGGCC GGCTCAGGCT
GCAGTCGCAA AGGCAGTTAT GGATTCCGTA GCTGATGGAG TGCTCCCTGA GGAACAGGCT
GATGACATTT TTATTATCGT TTCCGTATTT ATTGAGTGGG ATGCGAAAGA TAAGGACAAA
GTTTACGAAT TTAACTATGA GGCGACAAAG CTTGCAATAG CAAGAGCTAT GGAAGGCAGG
CCTACTGTCG AAGAAGCGCT TGCTAAAAAA GATTCAGCAA ACCATCCGTT TGCCTGA
 
Protein sequence
MFIKYAEVLN LVKNILKSMV GEALIGSGPE VAHIDLVIGP RGGSVEAAFM NSLAMPRQGH 
TPLLAVLEPN IQPKPTTLIV NKVTIKNVSQ AALMFGPAQA AVAKAVMDSV ADGVLPEEQA
DDIFIIVSVF IEWDAKDKDK VYEFNYEATK LAIARAMEGR PTVEEALAKK DSANHPFA