Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2016 |
Symbol | |
ID | 3627833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 2543732 |
End bp | 2546338 |
Gene Length | 2607 bp |
Protein Length | 868 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637700894 |
Product | hypothetical protein |
Protein accession | YP_305530 |
Protein GI | 73669515 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01567] S-layer-related duplication domain |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0853096 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGGGATTA AAAACTATAT CAAGATTTTA TGCTTATTTC TGGCATTTGG GTTGCTTTGT CTAAGTGTAG CTGCTCAGGC TTCAGATTCG ACAGGCAATC GCATCTGGGA TGAAAATGCA AATGAGAGCC TTACCTACAC ATGGACGCCT CAGACTTACT CGGGCTTTTA TTATGATCTG GATACCGGAG AAGGTTCTGA AAATCTGACA GTCCAGCTAA GTAAGGGCAG CCGGACAATT AATAAGAGAA ATCTGCAGTA CGAAACAGTA CCCATACAGA CCGACTTTGA GTATGGAAAG TGGGGATCTT ATGATGTCAT AGGGTTTATG GCAGAGCGCT ATTTTGCAGG GTACACCACA AACTCAAGCT TTGCAAATAA AGAAATTAGC GTTATCTCGG ACGGACAGCT TTCAAAAGTC CTGATAGACA CCGATGATAG GAAATCCCTG TACACTGGTT CCTCTCTTGT TCTTGACGAA GGATACTCTC TGAACATGGT TGAGGTTGAT ATTAACGGAA ATACCGTCTG GGTACAGCTT GAAAAGGACG GCAAGATAGT CGACGAAGCT TTCCTATCCT CCAATAGCGA CTATGTATAC AAAGCCGACA TCGGGGATAC TGAAGATGTG CCCATAATTG CAGTCCATTT TGCCCAGATC TTCAGCGGCA GCGAAACCAA TGCGGTTTTC GTGGAAGGAA TTTTCCAGAT CTCAGACCAG TACGTGAAAG TCCAGAATGG TGATGAATTT GGGGAAATGG AGGTAAGTTC CACCTCAAGT TCAGGCATAA AAATGAGAAA CAGCGACTCA ATCTCGCTTA GCAAGGGCGA TACTATTGAC ATCATGGGTA AGCTGAGTTT TGTTGTGGCT GATTCCAATG AACTTCGTTT TGCACCAATA GTTGAAACCT CCGAGCCCGG AACCTATGAA TTAAGAGGAA CGGTACACGA TGATAAGTTT GATACTATGG TCTGGACGCC TTTTAACTTC GAAGGTTTCT ATTATAACAT CGACGAAAAT ATTTCCACTG AAAGCCTTGC TATTGAAAAT CTCGATGGCA GGACAATTGA TGATGAATCC CTCGTCTATT CTACAAGGCC TGAAAATGTC AAATTTGAAC ATGAGGGCTG GGGAAGTTAT GAAGTTATCG GCTTCATGGC AGAGAAATAT TTTGCAGGAT ATCCTGAAAA CACTCTTGGC AATTCAAAGG GCATAAGTGT GTTGTCGGAC CGTGTTCTTT CAAAAGTTCT GATTGATGAC GATGACAAAA AATCCCTGTT CACTGGTTCT TCTTTAGTCC TGGAGAACGG CTACTCCCTT AAGGCAGCTG AGGTTGATGT TAATGGGAAA AACGTACTCT TTGAGCTTTA CAAGAATGGA AAACTCTTAG ATTCGGGAAT AGTTTCCCAG GGCGGGGACT ATATTTATGA AGCCGATATA GGTGGGGCTG AAAATGTTCC GATGATTGCG GTCCATATAA GTACGGTCTT CCGTTCCACA GAAACAGATG CCGTGTTTGT GGAGGGAATC TTCCAGATTT CGGATGATTT CCTGGAAATT TCTGGGGGAG ATTCTTTCGG TGAAATGAAA ATAACTTCGA TCTCCGACTC AGGCATCACA ATGAAAAACG AGGACTCAAT CTCCCTTTCA AAGGGTGATG TCGTAGACCT GATGGGCAAT GTCAAATTCA GGGTTGCAGA TGCTTCAGTC CTGCGCTTTT ATCCCTTTGT CGAAACCGAA ACCGAGGCAG GAGATCAACT GGATATTGAA ATACCCGATG CGCTTGTAGT CGGTAAGCCG ACCGAAATTT TGGTAACTGC GAGAAATGTT TTAGTCGTCG GTGCTGAAGT TTCTGTTGGA AACAAAAGCA TAGGTACTAC TGGAGACAGC GGAAATCTCA CCTTCACTCC CAGCAATGAA GGCAGCTTCA CTGTAACTGC GAGCCGGGAA GGTTATGTTT CCGGAACCAA GAAGGTGGAT GTCCTCGCAC AAGGTGTCCT GAAACTCTTA GTTTCAGTTT CTCCAGAAAC CGTCCGGGAA GGAGACCAGA TTGACATAAA GGTCACGGAC TCTGAGGAAA ACAAGCCTGT TTCCGGGGCG GATGTCTTTT TCGGTGGACA GATAATTGAC GCACAGACAG ACGAAAAAGG TATCACATCC TACATGGTTA CTGCTCCGGG AACGTATGTA GTAAATGCTA CAAAGACCGG TTATGAAGAC GGAGAAACCC AGGTCGAGGT GGCGGAGAAA GCCGCAACAC AGTTCACCTT CTCAGACCTC ACGATACAGC CTGCTTCAGT TGAGGCCGGA ACCGCGGTAA ATATCAGGGT GAACGCTATG AACAATGGAG ACGTCACAGG AGAATCCACA GTGGAATTGC TGGTTAATAA CGAATCAGTT GATTCTGAGA ATGTAACCCT TAATCCGGGT GAGAACAAAT CAATCGAATT CTCACACACT GAGGACACGC CAGGGACATA TACTGTTGAA GTAGGAGGTC TGAGCGAAAG TTATGAGGTG ACAAAGAAAG CTCCTTTCTT CAGTGGGATG GCTACACTTG GTATACTCTC CATAGCATTT GTTATTCTGC GGAAGAGAAG AAACTAA
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Protein sequence | MGIKNYIKIL CLFLAFGLLC LSVAAQASDS TGNRIWDENA NESLTYTWTP QTYSGFYYDL DTGEGSENLT VQLSKGSRTI NKRNLQYETV PIQTDFEYGK WGSYDVIGFM AERYFAGYTT NSSFANKEIS VISDGQLSKV LIDTDDRKSL YTGSSLVLDE GYSLNMVEVD INGNTVWVQL EKDGKIVDEA FLSSNSDYVY KADIGDTEDV PIIAVHFAQI FSGSETNAVF VEGIFQISDQ YVKVQNGDEF GEMEVSSTSS SGIKMRNSDS ISLSKGDTID IMGKLSFVVA DSNELRFAPI VETSEPGTYE LRGTVHDDKF DTMVWTPFNF EGFYYNIDEN ISTESLAIEN LDGRTIDDES LVYSTRPENV KFEHEGWGSY EVIGFMAEKY FAGYPENTLG NSKGISVLSD RVLSKVLIDD DDKKSLFTGS SLVLENGYSL KAAEVDVNGK NVLFELYKNG KLLDSGIVSQ GGDYIYEADI GGAENVPMIA VHISTVFRST ETDAVFVEGI FQISDDFLEI SGGDSFGEMK ITSISDSGIT MKNEDSISLS KGDVVDLMGN VKFRVADASV LRFYPFVETE TEAGDQLDIE IPDALVVGKP TEILVTARNV LVVGAEVSVG NKSIGTTGDS GNLTFTPSNE GSFTVTASRE GYVSGTKKVD VLAQGVLKLL VSVSPETVRE GDQIDIKVTD SEENKPVSGA DVFFGGQIID AQTDEKGITS YMVTAPGTYV VNATKTGYED GETQVEVAEK AATQFTFSDL TIQPASVEAG TAVNIRVNAM NNGDVTGEST VELLVNNESV DSENVTLNPG ENKSIEFSHT EDTPGTYTVE VGGLSESYEV TKKAPFFSGM ATLGILSIAF VILRKRRN
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