| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1990 |
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| Symbol | |
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| ID | 3627965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 2490112 |
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| End bp | 2495640 |
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| Gene Length | 5529 bp |
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| Protein Length | 1842 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637700868 |
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| Product | cell surface protein |
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| Protein accession | YP_305504 |
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| Protein GI | 73669489 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1520] FOG: WD40-like repeat |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0402817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAC ATACATTGAA AATATTTCTA ATTTGTATAA CATTGCTCCT GGTGGCGGCT
GCTCAGCCGG CACTGGGGTC CGACTGGGCC CAGTTCCAGA AAGACAATTA CAACTCCGGA
ATAACTGATG AGGCTGGCCC GATAAGCAAT AATGGCAGTT ATGCCTTCGC TGTCCTTACA
AAATCTAGTG GGATGAGCGG GATCGATACA ACGCCGGTGG TCGTCGACGA TGTCGTTTAC
ACCGTCGCTA ATGGCGTAGC TTTCGCCTTC AACAAGACCA CAGGGGATCA AATATGGAAT
CACACTGTAG CTGGCGGGTT CGTTCTGGCC ACGCCTGTGG TCGCCGACGG CAAGATCTTC
GTCGGCACCA GAAACGGCGT CATCGCCGCA CTCAACATCT CCACCGGCGC AGAGGTCTGG
ATCAACTCCA CTGGACTGGG CGGCGAGAAA GCTCAGGTGA ACACGCCTAT CATCTACGAC
TCCGGTAACA TCTACTTCGG AACCTGGTTT TCCAGCGGCG TCGGTTCATA CTACTGCGTG
AATGCCACTG ACGGCTCGTT CGTATGGGAG CGTGCCTGCA CCAGCAATGC GGGATACTAC
TGGGCCGGCG CTTGCGTGGT AGGCGACTAC CTCGTCTACG GTGGCGATAA CGGCCACCTA
GTCTCAGTCA ACAAGTACAC CGGGACGGTT ATGGAAGATG TGAGCACCGG TACCATCTTC
AGCTCCGGCA CCGGCAATAT CCGTTCCTCC ATGAGCTATG ACCAATCAAC CGGGAGGCTG
TACTTCGCTG CCGGTTCCTC CTGCTACTAT GTAGGATTCG ACTCCGGCAC TGGTACCTTC
GTCAAGAGCG TAAAGGGCTC CGGGACGATG TCGGGTAGCT CCACTTCCAC CCCTGCCGTG
TACAACGATC GTGTGTATGT GGGCTGCGGT GGTTCCCTGT ACTGCCTTGA CGCCGATTCC
CTGCAAATAA TCTGGTCCTA TGCTGTAGGT GCCCAGGTGC AATCATCTCC TGCCATCTCG
ACCTACTATG ATGATGGCGA CGGGGAGATT TACATCTATT TCACAACAAA CGATGCCTCT
TGCGGTATGT ACTGCCTCAA AGACATGCCG GGCAACACCG AACCCATCGT GCGGTTCGAG
TTCTTCCCGC CGGGCAGTAT GAAGCAGTAT AGCCTGCAGG GTGCGGCGAT CTCCGACGGC
ATGGTCTACT ATGGCAATGA TGCGGGTTAC CTGTTCGCTC TTGATGATCC TGCAATATGC
TTTGCTGCCA ACACTACCTA CGGCTCCTCT CCACTGACGG TTCAGTTCAC CGACTATAGC
GTCGGGGCGA CCGCATGGCA GTGGGACTTT GACAACGACG GAAACGTGGA CAGCACGGAA
CGGAACCCTA TATATACATA CAGTGCCGCA GGTAACTACT CCGTCAATCT GACGATTAAC
AAGTCGACAG GCAGCGTTCA GGAACTCAAG ACCGACTACA TCACCGTGAT CGAAGCGAAG
CCTCTGGAAG ATTATTTAAC ATATACTAAC AGTAGCAGCT CGATAACAAT CACCGGCTAC
ACCGGACCGG CTGGCGATCT GATCATACCC GATGAGATAG ATGGTCTTCC TGTCACAAAA
ATAGCCGACA GGGTGTTTCA AGGAACACCA TTGACCTCGG TGGTCATTCC TGACAGCGTC
ACCGACATTG GACTCTACCA GTTCCAGAAC TGCGAGGACC TTATCTCGAT CTACACGGGC
GGAGTACCAT CTATTTCAAC GAACAATATC CGGAACTGCC CCTCCTTAGA AACGATAACT
GTTGGCCACA GGCTTTCTTC TATTACCAGC TACTCGATCC GTGACTGCCC CTCCCTGGAC
GCCATGGTGT TTGAGGCCGA GGGCGACGCA CCGAGTGCTA GTGGCAACTG GAACTATAAT
TGTCCCAATC TGGTGGTGTA CTACTGTGAG AACGCTACCG GCTTCACCAC ACCGAGTTGG
GCTGGCAAGC CGTGTTATCC AATAGGCTCC CCAACCGCTG ACTTTTCGAC CAACACCATT
TTCGGCAGTG CACCGCTCAC GGTACAGTTC ACCTATTCGG GTGTGGGTGC GAACGCTTTG
TCCTGGTACT TCGACGACGA CGCTACTGTG GACAGCACTG CGAGGAACCC CAGTTATACC
TACGATACAC CGGGTACCTA CTCGGCCACT CTGTATGTCA ACAACCCATG GGGCAGCGAC
AGTAAGCTCA GAACAAACTA CATTACCGTG ACTGAGGCTC ACGCTGACGG TTGGGCTTAC
ACCAGCGACG GCACCTCGGT GACCGTAACC GGCTACTCCG GACCGGACAG CGACGTGACA
ATACCCGGTG AGATCGATGG CCTGCCGGTG ACCACTATCG GTGCCAGCGC GTGCAAGGCC
CTCACCTCCC TGACCTCTGT GACCATACCG GACAGTGTCA CCACTATCGA CGCCAGTGCG
TTCTACGGCT GCACCAACCT GATCTCGGTG ACTATGCCGG ACAGCGTCAC CACTATCGGT
TCCAGTGCAT TCTATGGCTG CACAGGCCTG GCCTCGGTGA CCATACCGAA CAGCGTTACC
ACTATCGGCT CCAGTGCGTT CTACGGCTGC ACAGGCCTGA TCTCAGTGAC CATACCGAAC
AGCGTTACCA CTATCGGTTC CAGTGCATTC TACGGCTGCA CCAACCTTAC TGTCATGATG
TTCAACGGCA ATGCGCCGAC GACGGTCGGC AGCAATTGGG CATCGGGCAC CAACCTAGTG
GCATATTACT CCGAAGGCGC TACTAACTTC ACAACCCCTG AGTGGAACGA AGTCCCGTGC
TACCCAGCAC TCACCGCCGC GACCGCCGAG TTCACCTCGA ACATCGTCTA TGGCAGCGCA
CCGCTCACGG TAAAGTTTAC CTATACGGGC GTGGGCGCGA ACGCGCTGGA CTGGTACTTC
GACAACGACA GTACTGTAGA CAGCACTGCA AGGAACCCCA GTTATACCTA CGATACGCCG
GGTACCTACT CGATCAAACT GAATGTCAGC AACCCCTGGG GCAGTGACAG TGAAGTTAAG
ACGGCCTATA TCACCGTAGC CGAACCGGTC GATAACTTTA CCTATCTCTC CGACGGTACC
TCGGTGACCA TAACCGGCTA CTCCGGACCG GGCGGCGATG TCGTCATTCC GAGCACGATA
GGGAACCTGC CGGTCACCGC TATCAGCGAC AGCGTGTTCA AGAGCAATAC CAACATCACC
TCGGTAACCA TACCGGACAG CGTCACAACC ATCGGCTCCA GTGCTTTCTA CGGCTGCACC
GGCCTGACCT CGGTGACCAT ACCGAACAGC GTGACTACCA TCGGCAACAA TGCGTTCAAC
GGCTGCACCG GCCTGACCTC GATGACCATA GGAAATAATG TCACTAAAAT TGACGATAGA
ATGTTCTATG GCTGCAGCGC CCTGATCTCG GTGGTCATTC CTGACAGCGT CACAACCATC
GGCGACAGCG CGTTCTACCA GTGCAGTAAC CTGGCTTCGG TGACCATACC TGACAGCGTC
ACAACCATCG ACAGCTATGC GTTCCGTGAC TGCAATGCAC TGACCTCAGT AACTATACCT
GACAGTGTCA CTAACGTCGA ATCAAGGCTG TTCTACGGCT GCACCGGCCT GACCTCGGTG
ACCATAGGGA TTGGCCTTGA TGAGATCCCC TCTTATATGT TCTACGGCTG CAGCGCCCTG
ACATCAGTAA CCATACCGGA CAATGTCACC GAGATAGGTA GCAATGCGTT CCGCAAAACC
GGCCTGACCT CGGTGACCAT ACCGAACAAA ATCGCCACCA TCGGCAGCAG TGCGTTCCGC
GACTGCAACG CCCTTACCTC GGTGATGTTC ACGGGCAATG CTCCTTCTTC AGTTAGCAGT
AGCTGGGCAT CTGGAAGCAC TTCCCTGACG GCGTACTACT ACGAAGGCGC TACCGGCTTC
ACCACACCGA CGTGGAACAG CGTCGCCTGT TACCCGTTAA CAGCGGCACC AGTGGCTGAT
TTCGAGGCCG ATGTGACATC AGGAATCGGA CCTATGATTG TGAAATTCAC TGATCTGTCC
ACCAGCTCTC CGGATACCTG GGCATGGGAC TTTGATAACG ACGGAACTGC GGATTCAACT
GAGCAGAACC CTTCGTATAC ATATACTTCA GTCGGTACTT ACACTGTCAA CCTTACGGTT
GCAAATGCAA ACGGGACCGA TTCCGAGGTA AAGACCGATT ATATCACAGT ATCCGAACCA
TCTACGCCTG CAGAACCGGT TGCTGCTTTC ACTGCTGATG TAACTGCCGG AACTGCTCCG
CTTACGGTTA ACTTTACCGA TCAGTCCACA GGCACACCGA CCTCCTGGAT CTGGGAATTC
GGGGACGGAG CAAACTCAAC CGAACAGAAA CCCTCGCATA CCTATAATGA GGCAGGTAAC
TATACCGTAA ATCTCACTGT CAAGAACTCA ATTGGCAGCA ATAGCACTGT AAAGACTAAC
TATATCACTG TATCTTCTAC GCCTGTAGAA CCTGAACCCG TTGCTGCATT CATAGCTGAT
GTGACCAGTG GTACTGTGCC TCTCATTGTC AACTTTATGG ATCAGTCGAC TGGCTCACCT
ACATCCTGGA TATGGGACTT CGGGGATGGT ACTAACGCTA CCGAACAGAA TCCAGTCCAC
ACTTACACTG CAACCGGTAC CTACACTGTC AACCTTACGG TTTCCAACGA GGATGGAAAT
GATTCTGATA TAAAAACTGG GTATATTAAG GTATCCAGTC AATCTTCAGC AAAGCCAGTA
GCTGCATTTA CTGCGTCTCC TACTTCAGGA AAAACACCAT TAAACGTTGC CTTTACTGAT
ACAAGCACTG GCTCCCCAAC TTCCTGGTTC TGGAATTTTG GAGATGGAGC AAAGTCATTC
CTACAGAATC CGATTCACAA GTATTCAAAA GCAGGAATAT ACACTGTTAA CTTGACAGTA
AAGAATGCTA AAGGCAAGAA CACGGTAACA AAAACAGAAT ATATAAACGT GATAACAAAA
CCGGTTGCAA ACTTCAACAG CAGTGTTACA TCGGGAAAAG CACCATTAAA GGTTAAATTT
ACTGATACAA GCACAGGAAT ACCTGCTAAA TGGAGATGGG ACTTTGGAGA CGGAGCAAAG
TCATTCCAAC AAAATCCAAT TCATAAATAT TCAAAGGCAG GAACATATAC TGTTAACTTG
ACAGTAAAGA ATGCTAAAGG CAAGAACACG GTAACAAAAA CAGAATATAT AAAAGTAATA
ACAAAACCGG TTGCAAACTT TTCTGCGAAT CCAACATCAG GAAAAGCACC ATTAAAGGTT
ACTTTTACTG ACACAAGCAC AGGAATACCT GCTAAATGGA GGTGGGATTT TGGAGACGGA
TCAAAGTCAT TCCACCAGAA TCCGATTCAC AAGTATTCCA AGGCAGGAAC ATATACTGTT
AACTTGACAG TAAAGAATGT TAAAGGCAAG AACACGGTAA CAAAAACAGA ATATATAAAA
ATTACATAA
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| Protein sequence | MNKHTLKIFL ICITLLLVAA AQPALGSDWA QFQKDNYNSG ITDEAGPISN NGSYAFAVLT
KSSGMSGIDT TPVVVDDVVY TVANGVAFAF NKTTGDQIWN HTVAGGFVLA TPVVADGKIF
VGTRNGVIAA LNISTGAEVW INSTGLGGEK AQVNTPIIYD SGNIYFGTWF SSGVGSYYCV
NATDGSFVWE RACTSNAGYY WAGACVVGDY LVYGGDNGHL VSVNKYTGTV MEDVSTGTIF
SSGTGNIRSS MSYDQSTGRL YFAAGSSCYY VGFDSGTGTF VKSVKGSGTM SGSSTSTPAV
YNDRVYVGCG GSLYCLDADS LQIIWSYAVG AQVQSSPAIS TYYDDGDGEI YIYFTTNDAS
CGMYCLKDMP GNTEPIVRFE FFPPGSMKQY SLQGAAISDG MVYYGNDAGY LFALDDPAIC
FAANTTYGSS PLTVQFTDYS VGATAWQWDF DNDGNVDSTE RNPIYTYSAA GNYSVNLTIN
KSTGSVQELK TDYITVIEAK PLEDYLTYTN SSSSITITGY TGPAGDLIIP DEIDGLPVTK
IADRVFQGTP LTSVVIPDSV TDIGLYQFQN CEDLISIYTG GVPSISTNNI RNCPSLETIT
VGHRLSSITS YSIRDCPSLD AMVFEAEGDA PSASGNWNYN CPNLVVYYCE NATGFTTPSW
AGKPCYPIGS PTADFSTNTI FGSAPLTVQF TYSGVGANAL SWYFDDDATV DSTARNPSYT
YDTPGTYSAT LYVNNPWGSD SKLRTNYITV TEAHADGWAY TSDGTSVTVT GYSGPDSDVT
IPGEIDGLPV TTIGASACKA LTSLTSVTIP DSVTTIDASA FYGCTNLISV TMPDSVTTIG
SSAFYGCTGL ASVTIPNSVT TIGSSAFYGC TGLISVTIPN SVTTIGSSAF YGCTNLTVMM
FNGNAPTTVG SNWASGTNLV AYYSEGATNF TTPEWNEVPC YPALTAATAE FTSNIVYGSA
PLTVKFTYTG VGANALDWYF DNDSTVDSTA RNPSYTYDTP GTYSIKLNVS NPWGSDSEVK
TAYITVAEPV DNFTYLSDGT SVTITGYSGP GGDVVIPSTI GNLPVTAISD SVFKSNTNIT
SVTIPDSVTT IGSSAFYGCT GLTSVTIPNS VTTIGNNAFN GCTGLTSMTI GNNVTKIDDR
MFYGCSALIS VVIPDSVTTI GDSAFYQCSN LASVTIPDSV TTIDSYAFRD CNALTSVTIP
DSVTNVESRL FYGCTGLTSV TIGIGLDEIP SYMFYGCSAL TSVTIPDNVT EIGSNAFRKT
GLTSVTIPNK IATIGSSAFR DCNALTSVMF TGNAPSSVSS SWASGSTSLT AYYYEGATGF
TTPTWNSVAC YPLTAAPVAD FEADVTSGIG PMIVKFTDLS TSSPDTWAWD FDNDGTADST
EQNPSYTYTS VGTYTVNLTV ANANGTDSEV KTDYITVSEP STPAEPVAAF TADVTAGTAP
LTVNFTDQST GTPTSWIWEF GDGANSTEQK PSHTYNEAGN YTVNLTVKNS IGSNSTVKTN
YITVSSTPVE PEPVAAFIAD VTSGTVPLIV NFMDQSTGSP TSWIWDFGDG TNATEQNPVH
TYTATGTYTV NLTVSNEDGN DSDIKTGYIK VSSQSSAKPV AAFTASPTSG KTPLNVAFTD
TSTGSPTSWF WNFGDGAKSF LQNPIHKYSK AGIYTVNLTV KNAKGKNTVT KTEYINVITK
PVANFNSSVT SGKAPLKVKF TDTSTGIPAK WRWDFGDGAK SFQQNPIHKY SKAGTYTVNL
TVKNAKGKNT VTKTEYIKVI TKPVANFSAN PTSGKAPLKV TFTDTSTGIP AKWRWDFGDG
SKSFHQNPIH KYSKAGTYTV NLTVKNVKGK NTVTKTEYIK IT
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