Gene Mbar_A1982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1982 
Symbol 
ID3627957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2476330 
End bp2477136 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content46% 
IMG OID637700860 
Producthypothetical protein 
Protein accessionYP_305496 
Protein GI73669481 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0030] Dimethyladenosine transferase (rRNA methylation) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTACGC AGATCGATTG GGAGACGGCC TGGGCTTCAG GCATCGGTGA GATGAATAGG 
CTTTCTACCA CTAACTACTG GAATCAAAGG GCAGAGGATT ATTCTGATAT GGTACTGGCA
AGTGACTGTA ACCATGGCCG TAATATCCTC AACCTGTTTG AAAAGGAAGG GCTACTGCAG
AAGGATTGGC ATATTTTAGA TATTGCATCA GGCCCAGGTG CAATAACGAT CCCATTTGCA
GAGAGGGTAT GCAGGGTGAC CGCTGTCGAG CCTGCGGAAA GGATGGCAGC AGCATTGATG
TCATATGCGC AGAACAGAGG GCTTTCCAAT GTTGAAATAA TCCCAAAGAC CTGGCAGGAA
GTAGATGAGA CAGCTTATTC GAAAAACTAT GACCTGGTTA TCTGCTGCCA TGCACTCTGG
CAATTTTCGG ACATTCTTTC GCATATCCGA CGAATGGAGG CAGTATCCAG AGGGTACTGT
TGTCTTGCTC ATGGGTTCGA AGCTCCTTCA GAGACACTCA AACTAACGGA AGCTTTCGGG
ATCAATGAGG GTGAGTTTGA TCAGTTCATC ACAGTTTTCA ATATTCTCAA TGATTCTGGA
ATGTACCCTA ACGTTGATGT GATCGATTAC ACACTTAATC GGTCAGTTAC CTCGGCAGTT
ACTTCGGTTG AAAAACGTGT CGAAAAACAT CGACCTCTGG ACTCCAGGGA CAGAGAGATT
ATTCAGGAAT ACGTGCAAAA TCACGCTAAT GAAGGCATAT ATCAGGTTAG CGGCAGGATG
GGTGTACTAT GGTGGAAAGT AGCATGA
 
Protein sequence
MVTQIDWETA WASGIGEMNR LSTTNYWNQR AEDYSDMVLA SDCNHGRNIL NLFEKEGLLQ 
KDWHILDIAS GPGAITIPFA ERVCRVTAVE PAERMAAALM SYAQNRGLSN VEIIPKTWQE
VDETAYSKNY DLVICCHALW QFSDILSHIR RMEAVSRGYC CLAHGFEAPS ETLKLTEAFG
INEGEFDQFI TVFNILNDSG MYPNVDVIDY TLNRSVTSAV TSVEKRVEKH RPLDSRDREI
IQEYVQNHAN EGIYQVSGRM GVLWWKVA