| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1937 |
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| Symbol | |
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| ID | 3626250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 2419849 |
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| End bp | 2421027 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637700817 |
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| Product | mannose-1-phosphate guanylyltransferase (GDP) |
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| Protein accession | YP_305456 |
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| Protein GI | 73669441 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | [TIGR01208] glucose-1-phosphate thymidylylransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.235204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCGT GTATCATGTG CGGAGGGGCA GGGACAAGGC TCAGGCCACT AACTTTCAAG
CATCCTAAAC CCAGCATACC GATTCTTAAT AAGCCGTCAG TCCGACATCT GATAGAGCAT
CTTTCAAGGG AAGGGTTCAA TGAAATAGTC ATGACCCTAG GGTACATGGG AGAGCGCATA
GAAGAGCAGC TCGGAGACGG GCACATGTTT GGAGTACATA TCGACTATGT GTATGAGAAA
GAAAAACTCG GAACTGCAGG CGGCGTTAAA AATGCTGAAG AGTACCTGAA AGACGAGCCG
TTTATCGTGC TTGGTGGAGA TCATGTACTT AACCTCGACC TGAGGGAGAT GTACCGTTTC
CATGAAGCAA ACGATGCTCC GGTAACCATA GGGCTTCTTT CGATTGACGA CCCGAGAGAA
TTCGGAATTG CGGACATGGA CATTAACAAC CGGATCCACC GCTTCCTGGA AAAACCGAAA
GCAGGCCAGA TATTCAGCAA CCTCGCAAGC ACTGGAATTT ATATTTGCAG CCCTTCTATA
TTTGAATGGA TCCCTAAAGG TAAGAAATAC GACTTTGCAA AAGACCTTTT CCCCTTCATG
CTTGCAGCCG ACAAAAAAAT CAATGGTGTA CTTGTCCGGG GAAAATGGAC TGACGTAGGA
AGTTCGGCCG CCTACAGGCA GGCGCAGCGC TGGATGCTCG ATGCCCTTCC TGGAACAACA
ATCGAAGGGA ATTTCACAAC CCGGAACGCA AGAATAAAGG GCCCTCTGTC CATAGGAAAC
AATGTATGCA TAGGTTCGAA TTCTTCCCTT GTAGGGCCAA TAGTAATAGG AGAAAACACA
ACTATAGGTG ATAATGTCCT TATCGGGCCT TACAGCGTGA TAGGCTCAAA CTGCACTATA
GAGAACAATA CAAAGATCCT TTCATCTTAT CTTTTTGATA ATGTGTTTAT AGGAAAGGAC
TCCAATCTCT CAGGAGGAGT GGTGTCAGAC GAAACAATTA TAGGAGAACA CTGCTTCCTC
GAAAATGGAA CCGTTATCGG ACATAAAGTA CTGATCGGAA GTAACTCAAC AATACATTCC
GGAGTTAAGA TCTGGCCCGA GATCGTTATA GATAAGAACT CAAGCATACA GGAAACCGTG
ATTAATTCCG GTTATGACGC TGCACATGAA GGTTCGTAA
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| Protein sequence | MKACIMCGGA GTRLRPLTFK HPKPSIPILN KPSVRHLIEH LSREGFNEIV MTLGYMGERI
EEQLGDGHMF GVHIDYVYEK EKLGTAGGVK NAEEYLKDEP FIVLGGDHVL NLDLREMYRF
HEANDAPVTI GLLSIDDPRE FGIADMDINN RIHRFLEKPK AGQIFSNLAS TGIYICSPSI
FEWIPKGKKY DFAKDLFPFM LAADKKINGV LVRGKWTDVG SSAAYRQAQR WMLDALPGTT
IEGNFTTRNA RIKGPLSIGN NVCIGSNSSL VGPIVIGENT TIGDNVLIGP YSVIGSNCTI
ENNTKILSSY LFDNVFIGKD SNLSGGVVSD ETIIGEHCFL ENGTVIGHKV LIGSNSTIHS
GVKIWPEIVI DKNSSIQETV INSGYDAAHE GS
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