Gene Mbar_A1891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1891 
Symbol 
ID3624292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2359108 
End bp2359656 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content40% 
IMG OID637700772 
Productrubrerythrin 
Protein accessionYP_305411 
Protein GI73669396 
COG category[C] Energy production and conversion 
COG ID[COG1592] Rubrerythrin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.395956 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAA TAACAGAACA GAATCTTATC AATGCATTTG GAGGAGAAAG CCAGGCACAT 
ATGAGATATT TACATTTCGG AAACAAAGCA GAAAAAGAAA AATATTATAA TGTAGCTCGC
TTATTTCGGG CAATTGCCCA TGCAGAATAT GTGCATGCAG GAGATCATTA CCGGGAATTA
AGACACCTCG AAGGAGGATT TGTTGCAAAT AGCATGGCGG CTTTTGGCCC TGGCGATTCC
GTAAAAAATC TTAAGCTGGC CATTGATGGC GAAACATATG AGATTGAAGA AATGTATCCT
ACATACATTG AAGTTGCAAA ATTCCAGGGC GAAAAAGGAG CACAAAGAAG CTTTGAATGG
TCATATGCCA GTGAAAAAAT GCATAAACAA CTTTTTGAAA GGGCATTAGA CTCGGTTAAC
TCAGGAAAAG ACATTGATCT CGGTCCTGTC CAAGTTTGCG AGGTATGCGG ATATACCTTT
GAAGGAGAAG CACCCGACAG GTGTCCTATT TGTGGTGCCC CAATCAACAA ATTTACTGCG
TTTAAATAA
 
Protein sequence
MKKITEQNLI NAFGGESQAH MRYLHFGNKA EKEKYYNVAR LFRAIAHAEY VHAGDHYREL 
RHLEGGFVAN SMAAFGPGDS VKNLKLAIDG ETYEIEEMYP TYIEVAKFQG EKGAQRSFEW
SYASEKMHKQ LFERALDSVN SGKDIDLGPV QVCEVCGYTF EGEAPDRCPI CGAPINKFTA
FK