Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1823 |
Symbol | |
ID | 3625281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 2278110 |
End bp | 2279891 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637700705 |
Product | putative chloride channel |
Protein accession | YP_305344 |
Protein GI | 73669329 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG0038] Chloride channel protein EriC [COG0517] FOG: CBS domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.039576 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGAAGTTA GTCCAGAGCA CATATCGGCA TTTCACAATG TAAAAAAACA TCCCAGGATA ACAGAGTATA TTACCCGGTT TGATACCGAA ACTGCCAGGG TCAATTCAAT TGCTATTATA ATCGGGCTCC TTACAGGGTT CGTGATAGGA GTTTATGACC AAACTCTCCA GTACAGCAAT ACTTTTCTGG GTATGCAGCA AGGATCCCCG TTACACGAGT TCCCACATTA TTATGTGTTA TTCGTGCCAG CCCTTGGAGG GTTGCTGGTA GGAATAATCT CCCATTTTCT GATGAAAAAG AAGTACGGCG TTGACGGACT TATAGAAACC GTAACCCTCC GCGGAGCAAG GCTTAATCTC AAGGATGTTT TTCTGGAGAT TTTTACTTCA ATAATCACAA TCAGTTCCGG AGGTGCACTG GGAAAGGAAG CACCTGGAAT CCTTGCAGGA GCCGGGACTG GAGCTTTTCT CGGGAGAATC CTGAAGAGCC CGGAAAGGCA GCTTCAGATA CTTCTAGGTT GCGGAGCTGC CGGCGGAATT GCGGCTGCCT TTAACGCCCC TCTTGCGGGA GTAGTCTTTG TGGTAGAGGT GATTTACGGG GAACTTGAAA CCAGGACCTT TATTCCGATA GTTATCTCCT CGGTCTTTGC AACTCTCGTC TCAAGCACAC TTTTCGGAGT TAGACCCATA GAGATCCCTT TCTACCAGCT GGTAAGTCCC TACAAAGAAC TCGGGCTCTA CCTTGTGCTA GGGCTTCTTG CAGGTTTTGT CTCTACACTA CTGATCAGGA CGCTTTACTA CATAAAAGAT ATTTTTTCGG GAATCCCTTT CCATCCCGTT CTCAAGCCTG CCCTGGGAGG GCTCGCAGTA GGTGCAATAG GCCTTTTTTA CCCCAGGGTT CTCGGAATGG GATATGATGT AATAACGGAT GCACTCAACA ACCAGCTTAC TTTCAAGCTC CTGCTAATCC TGCTCTTTTT GAAGGTCCTC GCTTTTTCCC TGAGCTTGGG CTCTGGAGGC TCAGGAGGAA CGATTGTTCC TTCCCTTTTT ACAGGTGCAA TGCTGGGAGG AGCTTTCTGG ACAATCGCAA ACTTGTTTTT CCCTGGGGCT GTAGCCGATC AAGGAGCATA TGCTATGGTT GGGATGGGCG CGGTCTTTGC CGGAACTGCC AGGGCTCCCC TTACTGCCAT CCTGATCCTG TTTGAGATTA CAAGAGATTA TAATATGATT CTTCCTCTCA TGTTTGCCTG CGTCCTCAGC AATGTGATGT CAAATGCCCT TTATCCGGAG TCCATTTTTA CGGAGGGTCT ACGCAGGAAA GGGTTTAAGA TCCGAAAAGG CAGAGAAGTA GATATCATGA GCTCCATGCT TGTAAAAGAT GCCATGATCA CATATGTCCA GACAGTTTCT GAGGATAAGA GTGTTGAAGC ACTTACGACC CTAATGCAGG TAAGCCGCCA CGTCGGTTTT CCGGTCCTTG ATTCCAAAGG CAAACTTTCA GGTATAGTAA CCCTTTCAGA TCTCCGGAGC AAAGTAAAGT CCGGAGATGT CGACAAAAAA GTAAAAGATA TAGCTACCCA GCGTCTTGAA GTTGCCTACC CCGATGAAAC CCTTGACGCA GTACTCAAAC GCTTCGCTTC AAAGCAAATA GGCAGGCTTC CAGTCGTGGA CAGAGAGGAT AAAACCAGAC TTCTCGGTCT TATTACCCGA AGCGATATCG TAAATGCATA TAACAAGAAA GTCGTGGAAA AAGTCAGGGT ACATACTGAA TACACATACT GA
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Protein sequence | MEVSPEHISA FHNVKKHPRI TEYITRFDTE TARVNSIAII IGLLTGFVIG VYDQTLQYSN TFLGMQQGSP LHEFPHYYVL FVPALGGLLV GIISHFLMKK KYGVDGLIET VTLRGARLNL KDVFLEIFTS IITISSGGAL GKEAPGILAG AGTGAFLGRI LKSPERQLQI LLGCGAAGGI AAAFNAPLAG VVFVVEVIYG ELETRTFIPI VISSVFATLV SSTLFGVRPI EIPFYQLVSP YKELGLYLVL GLLAGFVSTL LIRTLYYIKD IFSGIPFHPV LKPALGGLAV GAIGLFYPRV LGMGYDVITD ALNNQLTFKL LLILLFLKVL AFSLSLGSGG SGGTIVPSLF TGAMLGGAFW TIANLFFPGA VADQGAYAMV GMGAVFAGTA RAPLTAILIL FEITRDYNMI LPLMFACVLS NVMSNALYPE SIFTEGLRRK GFKIRKGREV DIMSSMLVKD AMITYVQTVS EDKSVEALTT LMQVSRHVGF PVLDSKGKLS GIVTLSDLRS KVKSGDVDKK VKDIATQRLE VAYPDETLDA VLKRFASKQI GRLPVVDRED KTRLLGLITR SDIVNAYNKK VVEKVRVHTE YTY
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