Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1768 |
Symbol | |
ID | 3625998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 2166786 |
End bp | 2167679 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637700647 |
Product | ABC transporter, permease protein |
Protein accession | YP_305289 |
Protein GI | 73669274 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.689624 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAGGTG CAAGATCAAT TGCAGAACCA ACAATTAAAG ATACAGTTAT TCACAGAATG GACCCAAGAG CTAAGATCCT TATCCTGATT TCCACTGTTT TTGTCGCTGT GTCCCTGGAT AACCAGAAAA CGATGTTTTT GTTATTTCTG ATCATACTCT CAGGATTCGT AATTGCAAAA ATGCCGGCAA TAAAGATCAA GACCCTGGTG ATATTGCTTG TACTTTTGAT CTGGGGAACT ATTTACTCAC AGGCTCTCTT TTATTCTCAA CTTCCGAGAA CTGTGATTTT TACTATAATC CGTCCCGATT TTCCGGTTTT GGGATGGTTG ACAGGCGGCG GTCTGTTCGT ATATGAGGAA GGACTTCATC ACGGCGCAGT TCAGGGCCTT AGATCGGCTT CAATCCTTTC TCTTGGACTG TTAATGTGCT GGACCACTGA CTCAAGGGAT ATGTTAAACG GTCTGGTAGG ACTCAAGGTA CCTTATAGCG TAGCTTTTAT GGTAATCACA GCAGTAAGAT TTCTGCCAAT AATAATCACT GAAGTAGCTA CCGTGATAAC AGTCCAGCGG CTCAGGGGAT TTAATCCGAA AAAATTTGGG TCAGGAATCA TAAAAACATT ACTCAATATA TTAACCCCGA CTCTCGCAAA CTGTGTAAGG AGAACAGGAA CCCTTGCAGT TTCAATTCAG AGTAGGGCTT TTCGGGCAAA TCCCGATAGG ACATCTCTCA AAAAACTGGA GTTTTCAAAC ATTGACAAAG TAATGATTAC AGTTTTTGTT TTTGCAGCCA TAAGTATTGT TGTCATAAAA CTTCTTTACA ATATGTATAC AAGTGGAATT TATTATACTT CAAGTTTAAG ACCTGTTTAT GCAATTGCAG GGGGATACCT TTGA
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Protein sequence | MIGARSIAEP TIKDTVIHRM DPRAKILILI STVFVAVSLD NQKTMFLLFL IILSGFVIAK MPAIKIKTLV ILLVLLIWGT IYSQALFYSQ LPRTVIFTII RPDFPVLGWL TGGGLFVYEE GLHHGAVQGL RSASILSLGL LMCWTTDSRD MLNGLVGLKV PYSVAFMVIT AVRFLPIIIT EVATVITVQR LRGFNPKKFG SGIIKTLLNI LTPTLANCVR RTGTLAVSIQ SRAFRANPDR TSLKKLEFSN IDKVMITVFV FAAISIVVIK LLYNMYTSGI YYTSSLRPVY AIAGGYL
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