| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1733 |
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| Symbol | |
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| ID | 3625778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 2123192 |
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| End bp | 2124670 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637700612 |
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| Product | reverse transcriptase |
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| Protein accession | YP_305255 |
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| Protein GI | 73669240 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000121059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGAG GCAAACTTCT GAATGTAAGT TGTTCAACGA TATCCTTTCT GGATAAGAAG
CTTACAAACG CTCAACTTTG CCAGATGTGG AAAAACATCA ACTGGTATCA AATAGAAAAG
AGAGTTAATA AGTTGCAAAC TCGGATTACA AAAGCAGTTC TACAAAACAA ATGGAATCTT
GTCAAGAGAT TACAATATTT ACTGACTCAC TCCTACTTCG CCAAACTTTT GGCAGTAAGA
AGAGTTACTC AAAATAAAGG AAAAAGGACA TCTGGAATTG ATGGTGAAAA ATGGTTAAGT
TCTGCCTCCA AAATGAAAGC TGTCCTTAGT CTCACTGGTA AAAGATACAA AGCCAAACCG
CTTAAACGAG TCTTTATCAA TAAACCTGGT AAGACGAAGA AACGTCCCTT AGGTATCCCT
ACAATGTATG ACAGGGCTAT CCAATCTTTA TATTCACTGG CTCTGGAACC AGTAGCTGAA
ATTAAGTCTG ACCTACGGTC TTTTGGCTTC AGAAAACATC GAAGTACCAA GGATGCCTGT
CAGCAAATCT TTCTATGTCT GAGTAAAAAG ACTTCAGCTC AATGGATTTT GGAAGGTGAT
ATTAGAGGAT GTTTCGATAA TATAAATCAT CAGTGGTTGC TGACTAATAT CCCAATAGAC
AAAGCTATAC TAACTCAATT TCTCAAAGCG GGATTTATTT ATAAACGTCA TCTGAATCCA
ACGAAAGCAG GTACGCCACA AGGTGGGATT ATCTCTCCTA TTCTGGCTAA TATGACATTG
GATGGTATCG AGAAAATGCT TCTTGTTAAG TACCCTAAAA AAGGGAAAAA TTCCAAGAAA
GTCAACTTCA TAAGATACGC TGACGATTTC ATAGTCACTG CTAATTCCAA AGAAACTGCA
GGGGAAATTA AGGACGAAGT TGTTGCTTTT CTTAAAGAGC GAGGTCTTGA GCTCTCCGAT
GATAAAACCT TTATCACAAA CATTAATGAA GGCTTTGACT TCCTCGGCTG GAATTTCCGC
AAGTATAAAG GTAAGCTTCT GATCAAACCT TCCAAAAAGT CCATTAAAAG ATTTACTGAA
ACAATTAGTC AAACCATAAC GGAAGGAATG GCATGGTCTC AGAAAGTCTT AATTTCCAAA
CTAAATCCTA TAATAAGAGG CTGGTCCAAC TACCATAATT CTGTGGTTTC TTCGGATACT
TTCCAGAAAC TTGACCACAT AATATGGGAA CTGTTATGGA AATGGGCTAA AAGAAGACAT
CCGAATAAAT CCAAAGATTG GATCGTCAAC AAATACTGGA ATAGAAGCAC TTCTAGAAGG
TGGAATTTCA GAACAGAGAT TAATGAACTC TTGCTCTTAT CTACAACCAG GATTTACAGA
CATATTCCTT TAAAGCTGCA AATGAATACA TTTCTTGATA AGGACTACTT CCACGAACGT
CAAAACAAAC TTAGTTATCG GAAGGTTTAC TCCATTTGA
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| Protein sequence | MKGGKLLNVS CSTISFLDKK LTNAQLCQMW KNINWYQIEK RVNKLQTRIT KAVLQNKWNL
VKRLQYLLTH SYFAKLLAVR RVTQNKGKRT SGIDGEKWLS SASKMKAVLS LTGKRYKAKP
LKRVFINKPG KTKKRPLGIP TMYDRAIQSL YSLALEPVAE IKSDLRSFGF RKHRSTKDAC
QQIFLCLSKK TSAQWILEGD IRGCFDNINH QWLLTNIPID KAILTQFLKA GFIYKRHLNP
TKAGTPQGGI ISPILANMTL DGIEKMLLVK YPKKGKNSKK VNFIRYADDF IVTANSKETA
GEIKDEVVAF LKERGLELSD DKTFITNINE GFDFLGWNFR KYKGKLLIKP SKKSIKRFTE
TISQTITEGM AWSQKVLISK LNPIIRGWSN YHNSVVSSDT FQKLDHIIWE LLWKWAKRRH
PNKSKDWIVN KYWNRSTSRR WNFRTEINEL LLLSTTRIYR HIPLKLQMNT FLDKDYFHER
QNKLSYRKVY SI
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