Gene Mbar_A1690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1690 
Symbol 
ID3625488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2087490 
End bp2088008 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content38% 
IMG OID637700569 
Producthypothetical protein 
Protein accessionYP_305212 
Protein GI73669197 
COG category[S] Function unknown 
COG ID[COG1739] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00257] uncharacterized protein, YigZ family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.296344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.209957 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAAGTG AAGCTGAGGC AAAAACTTTC ATAAAAGGTA TAAAGGAATT GCACCGCGAT 
GCAAACCATA ATGTTTCGGC TTATTTTATA AAAGAAAAAA GCTCTTTTGC TCTCAAATAT
GACGACGACG GTGAGCCTGC AGGCAGCTCA GGAAAACCTA TTTTTAAAAT ACTCGAATCA
AAAGAAATTC TGAACGCAGC TGTGGTCGTG ACCCGGTATT TTGGGGGAAT AAAACTGGGT
TTCGGAGGAC TTTCGAGAGC ATACAGAGAT ACGGCACTCT CGGCTATTGA AGATGCAGAA
GTTATCGAAG TCTTCGAGCA GGCCAGATTA AGAATATGTC TGAGCTATTC AGAAAGTCAA
AAAGTAAGAA ATCTGGTAGA AAAATACGCA GAACTCCAGG AAGAAACGTA TTCAGATAAT
GTGGAATTCA TCATTCTTGT AAGAAAGGAT CTTGAAGATG AATTCATTAA AAAAATAATA
GATCAAACAA AAAATAAGGT CGCACTTGAA AAACTTTAA
 
Protein sequence
MESEAEAKTF IKGIKELHRD ANHNVSAYFI KEKSSFALKY DDDGEPAGSS GKPIFKILES 
KEILNAAVVV TRYFGGIKLG FGGLSRAYRD TALSAIEDAE VIEVFEQARL RICLSYSESQ
KVRNLVEKYA ELQEETYSDN VEFIILVRKD LEDEFIKKII DQTKNKVALE KL