| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1643 |
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| Symbol | |
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| ID | 3625441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 2026807 |
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| End bp | 2028456 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637700524 |
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| Product | DNA ligase (ATP) |
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| Protein accession | YP_305168 |
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| Protein GI | 73669153 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | [TIGR00574] DNA ligase I, ATP-dependent (dnl1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGAAAGAA AGGAAATAAA GGACAGTGCA TACCTTTTTC TCGGGAGCAT AGGACCTGCC
TTTGAGAATA TAACACTGGG AATAGGAGAT AAGCTCGCTT TAAAAGCTAT TGCCGGAGCA
TACAGAGTTT CCGAAGAGGA GGTTAAAAAA AGATATTCAA GGACAGGGGA CCTTGGGGAT
GTGGCGTTTG AGTTAAACCA AGGAGAAGAA AAGTCTCTGG CAATCGATGA AGTGTTTGGG
AGCCTAAAAG AGATAAAAGA AGCCTCAGGA AAAGGAAGTC AGGAGGAAAA AACCGGGCTG
CTTTCCAGCA TCCTGCAGCG AGCTAGCCCC AAAGAAGGAA AATATATAGT CAGGATTGTA
CTTGGGAAAC TTAGGCTTGG TTTTGGGGAC CAGTTTCTAC TTGAAGCATT TTCTATTGCT
TTTACAGGAG ACAAAAAATA TGTCGTCAAG ATCAAAGAAA GCTACAGCGT CTGTACCGAC
ATCGGAGAGC TTGCAGAATC CCTTGCAGAA CAAGGTCCAA AAGCTCTTGG GCACTTTTCC
ATAAAACTCG GCCGGCCTGT CAGGTCAATG CTTGCGCAGC GCGTGAAAAC TTTTGAAGAG
CTTGAAGAAA GAATCCCCGG AAAAAAAGCA GCAGAAGAAA AATATGATGG GGAGAGAGTG
CAGATCCATA AAAACGGAGA AGAGATCAAA GCTTTTTCTC GAAGGCTTGA AGATATAACT
GCCCAGTATC CCGATGTTAT AGAAGCAGTC AGGAAAGGCA TTCTTGCGAA GAAAATCGTG
CTTGATGGGG AAATTATTGC ATACGTTGAA GGCGGGAAAG CAAACGATTC AACTGGAGAA
TTTTATTCAT TCCAGAGACT AATGAAGAGG CGCAGAAAGT ATGAGGTCCA AAAATATACT
GAAATTTGCC CTGTTGCCGT ATTCTTTTTT GATATTCTGT ACCTGGAAGG AAATTCGCTC
CTGAAGAAAC CTTACCCGGA AAGACGGGCT ATCCTTGAGG AACATGTAAA GGAATCAGAA
ATTCTTCACC TTGCTAGAAG AATTGTTACG GATAATCTTG AAGAGATCGA GGACTTTTTC
AACGAGGCTC TGGAAAAGAG GCTTGAAGGA ATTATAATCA AATCCATGGG TCGGAACTCA
GCTTACGAAG CCGGAAAAAG GAGCTGGTTC TGGCTCAAAT GGAAAGAAGA ATATGCCAGC
GGGATGAGGG AGACCTTTGA CCTTGCAATT ATAGGGAAAT ATTACGGGCG AGGAAAAAGA
AAAGGTTCAT TTGGAGCACT CCTCTGTGCA ATTCTTAATG GAGAGGAACA GCGTTTTGAA
ACTTTTACAA AAGTCGGGAC CGGGTTCACA GAAGCGGACG CTAAAGAAAT CGACAGCCTG
CTTTCAGAGC ATATTATTTC TGAAGTCCCT AAAAATGTAC TCATAAAAAG TAGAATGCTT
CCGGATATCT TTGTAGAGCC TTCTCTGGTT ATTGAAGTCC TTGGTTCGGA GATTACTGAA
AGCCCGAGTC ACACTGCCGG ACAGGGAGAA GGAGATACCG GGCTTGCTCT GCGTTTTCCT
CGCTTTTTAC GCATAAGGCA TGATAAAGGA CCTTATGATA TTACTACACT TACAGAAGTC
AGGAATTTAA AGGAAGGCAA AAGCATTTGA
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| Protein sequence | MERKEIKDSA YLFLGSIGPA FENITLGIGD KLALKAIAGA YRVSEEEVKK RYSRTGDLGD
VAFELNQGEE KSLAIDEVFG SLKEIKEASG KGSQEEKTGL LSSILQRASP KEGKYIVRIV
LGKLRLGFGD QFLLEAFSIA FTGDKKYVVK IKESYSVCTD IGELAESLAE QGPKALGHFS
IKLGRPVRSM LAQRVKTFEE LEERIPGKKA AEEKYDGERV QIHKNGEEIK AFSRRLEDIT
AQYPDVIEAV RKGILAKKIV LDGEIIAYVE GGKANDSTGE FYSFQRLMKR RRKYEVQKYT
EICPVAVFFF DILYLEGNSL LKKPYPERRA ILEEHVKESE ILHLARRIVT DNLEEIEDFF
NEALEKRLEG IIIKSMGRNS AYEAGKRSWF WLKWKEEYAS GMRETFDLAI IGKYYGRGKR
KGSFGALLCA ILNGEEQRFE TFTKVGTGFT EADAKEIDSL LSEHIISEVP KNVLIKSRML
PDIFVEPSLV IEVLGSEITE SPSHTAGQGE GDTGLALRFP RFLRIRHDKG PYDITTLTEV
RNLKEGKSI
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