| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1604 |
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| Symbol | |
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| ID | 3624228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 1975038 |
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| End bp | 1976213 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637700485 |
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| Product | geranylgeranyl reductase |
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| Protein accession | YP_305130 |
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| Protein GI | 73669115 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATGATT TGATCATAGT AGGAGGAGGG CCTTCAGGAG CATCGGCAGG AAAGACAGCC
GGGGAAAGGG GACTTTTAAC CCTCTTAATC GAGAAAGAAA ATTTTCCAAG GTATAAACCC
TGTGGAGGGG CTCTTTCTTC TTATGGTTTA TCTTGCCTGG ATTTCAAGCT CCCTGAGTCC
ATAATTGAGA GAAATATCCC AAAGGTGGGG GTTTATTTCA GGGACCGGTT TGTAGAAGGA
ATGAAAGAAA ATAACCTGGC TCTGCTGGTT TCCAGAAAAG TCTTTGATAA CTTTTTGCTT
GAAAAAGCCA GAGGGGCCGG AATTGAGGTC CATACCGGGG AAGAGGTTCT TGACCTGGTT
GAAAAAGAGG ATTTCGTTGA AGTCAGAACC ACAGATAATA CTTATCTGGG GAGTTTCGTT
CTTATTTCAG AAGGGTCGGG TGGAACCCTT AAATACAAAG TAAGGCCGAG AGATAAAATA
ACAGAATATG GACTGGGCCT GGTGTCGGAA ATTCCTGATG ACGATGAAGT AATAAGGAAT
CGGTTTCCAG GCACTATAAA TATTCATTTC GGGGTTGCGA AGGGAGGTTA TGGTTGGATC
TTTCCTCATG CCGGATATTA TTCTGCAGGA ATTGTAGGGG CAGCTCAATA TCTTGAGCAT
CCGAAAAAAA CACTGCTAGA TTTTCTGGAG GAAAACGGCT TATCAGGGGA CTTTCCGGTT
CGGTCCCATG TTATCCCCAA AGGAGGGATA AAAAGAAAAA TCCTCAATTC AAGGCTGCTT
CTGAGTGGGG ATGCTGCCGG ATTTGTAGAT GCTTTCACAG GAGAAGGTCT TTCATATGCA
ATCCGGTCAG GACAGCTTGC TGCGGAGACC GTTGCCGACC TTGTCATGTA CAGTCTGAAG
TTAAATAGCC TTAAAGCCTA TGAGTTCAGT TGCAGGCAGG AATTCGGAAA TTATCTTTCC
AGTTCTCTTA AACTGGATAA AATAATGCAT CGTTTTCCTG AGGCATCTTT CAAACTGGCT
GTTAGCAACA GGGAGATCCT GGATAAGTAC CTGGATGAGG TGGTAACTAA CAGGAATTAT
AAAGAATATG TCCGCTGGTT ACTGTTGAAT TTCTGCCTGG TTGAACCTGT CTCCAGAATA
AAATCTCTTA CCCTGGAAGG AATCGATAAG GACTGA
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| Protein sequence | MYDLIIVGGG PSGASAGKTA GERGLLTLLI EKENFPRYKP CGGALSSYGL SCLDFKLPES
IIERNIPKVG VYFRDRFVEG MKENNLALLV SRKVFDNFLL EKARGAGIEV HTGEEVLDLV
EKEDFVEVRT TDNTYLGSFV LISEGSGGTL KYKVRPRDKI TEYGLGLVSE IPDDDEVIRN
RFPGTINIHF GVAKGGYGWI FPHAGYYSAG IVGAAQYLEH PKKTLLDFLE ENGLSGDFPV
RSHVIPKGGI KRKILNSRLL LSGDAAGFVD AFTGEGLSYA IRSGQLAAET VADLVMYSLK
LNSLKAYEFS CRQEFGNYLS SSLKLDKIMH RFPEASFKLA VSNREILDKY LDEVVTNRNY
KEYVRWLLLN FCLVEPVSRI KSLTLEGIDK D
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