Gene Mbar_A1601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1601 
Symbol 
ID3624320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1971100 
End bp1971720 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content38% 
IMG OID637700482 
Producthypothetical protein 
Protein accessionYP_305127 
Protein GI73669112 
COG category[S] Function unknown 
COG ID[COG1852] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAATA TTATTGGGGA AGCTCTTTTC ATTTTTGTTA TTTTATCCCT TATTCTTTCT 
GGCATAGCTC TAGTTGTCAG TAAACGTAGT CTCACAGGAA ATGTCTACCT TGCAGGTTTT
TTCGCAAATA TACTTGATTT TTTTTATTTG CCTCTGAGAC ACCTTTTCCT TAAATTTTCC
GATACGCGAG TTCTGGATAA GTGGATGGCA TCTCTGAAAA ACCGAGCCTA TAAGTCTGAT
TTTGCAAAAA CAAAAAAGAG GATTCTCCTG GCGCCGCATT GCATGCGGAG TCTTGACTGC
CCGGCTTATT CTACTCAAAC CGGAATACAG TGTAAATCCT GCGGGAAATG CGTCTTTACT
CAGTTGAAAA AAGATGCTGA GAAATATGGG TATAAATTAT TCATTGTTAC AGGTTCTTCC
TACGTAAAAA ACATCCTTAA AATGGAAGAT GCTGATGGTG TCCTTATGAT TGCCTGTGAT
TACGAAATCA ATAAAGTCAT GCGTGCGCTT AAAGGTAAGG GAGTCGTAAG CTACGGTATT
CCTATGGAAA GAGACGGCTG CTTCGGGACA GAAGTAAATT ATCAGAACGT TCTGGATGTT
TTTGAAATCT TTAAGAATTA A
 
Protein sequence
MYNIIGEALF IFVILSLILS GIALVVSKRS LTGNVYLAGF FANILDFFYL PLRHLFLKFS 
DTRVLDKWMA SLKNRAYKSD FAKTKKRILL APHCMRSLDC PAYSTQTGIQ CKSCGKCVFT
QLKKDAEKYG YKLFIVTGSS YVKNILKMED ADGVLMIACD YEINKVMRAL KGKGVVSYGI
PMERDGCFGT EVNYQNVLDV FEIFKN