Gene Mbar_A1600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1600 
Symbol 
ID3624319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1970472 
End bp1971107 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content42% 
IMG OID637700481 
Producthypothetical protein 
Protein accessionYP_305126 
Protein GI73669111 
COG category[S] Function unknown 
COG ID[COG1852] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATATTC CTTACGAATT TCTTGGAAAA ATATTTATAT ATCTGGTTCT TTTTGCTCTC 
GCAGGAACAG GGATTGCCCT GCTAATAGGG GCATATTCCG TTAAAAAACG CAGGATAATT
TTTCCGGAGT TCGTGTTGTT TACACTTTAT CTTTTCTATT CTCCTGCAAA ATGGATCTGC
AAAGCTTTCA GGATAAGGGA CACCCTTGTT GACGATATTC TTATTGATGT CCGAAATGCT
GTGACGTATA ACGATTTCAG GCGTGTTAAA GACAAGAAAA TCCTGCTTCT TCCTCAGTGC
TTGCGCCACC CGAACTGTAA GGCCAGATGC GACCCGGTAC ATGGTTATGA GTGCAAGCGT
TGCGGGCTAT GTGATATTTC AAAAATCTCC GAGGCTGCTG ATAGGTGCAA TTTCCAGGTT
TTTGTAATAC CAGGAGGAAG TTTTGTCAAA AAGATTTTTA AAGAATATAA GCCTGAAGCC
TGCCTTGGCG TGGCCTGCTA TAACGAGCTT TCCGAGAATA TGCAGGCGGT ATCGTTTGTC
CCCGTACAGG GTGTTCTTCT TTTAAGGGAC GGATGTTTCA ATACTGAAGC GAATGTTGAG
GAAATAATTC AAAAAATGGA GATGTGCAAT GTATAA
 
Protein sequence
MHIPYEFLGK IFIYLVLFAL AGTGIALLIG AYSVKKRRII FPEFVLFTLY LFYSPAKWIC 
KAFRIRDTLV DDILIDVRNA VTYNDFRRVK DKKILLLPQC LRHPNCKARC DPVHGYECKR
CGLCDISKIS EAADRCNFQV FVIPGGSFVK KIFKEYKPEA CLGVACYNEL SENMQAVSFV
PVQGVLLLRD GCFNTEANVE EIIQKMEMCN V