Gene Mbar_A1599 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1599 
Symbol 
ID3624318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1969137 
End bp1970366 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content48% 
IMG OID637700480 
ProductCoB-CoM heterodisulfide reductase, subunit D 
Protein accessionYP_305125 
Protein GI73669110 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAC GTACCCCTTC AATCGATACG AAGAATCTTA CTGCAGTCCA GCTCATGGAG 
CTTGATGCCT GTGTTCGCTG CGGTGAGTGT GTAAAATGGT GTCCGACTTA TGCCGCTTCC
GGCGGGAAAC CAGGATTGGC TCCAAGAGAC AAGATCCTGC GCTGGAGGCA GTACATGAAC
AAGTCCTATG GACTTAAAGC AAAACTCTTT GGCCCACAGG AAGTTTCTCC TTCAGAGCTT
GAAGAATTTA AAGATGATGT CCACGGCTGT ACTACATGCG GTGTCTGTGC AACAGTTTGT
GAAGCAGGTA TTAACACTGT GGAAATCTGG GAAGCTATAA GGACAAACCT TGTAAAGAAG
GGCATAGGTC CTTATGGGAA ACAGAGCGCG TTTCCAAAAC TTGTTGGGCA GTACCATAAC
CCTTACATGA AGGACCAGAA AGACAGACTT GCCTGGGTTC CTCCAGACGT GAAAATAGAA
GACAAAGCAG ACATTGTCTA TTTCACTGGC TGTACTGCAG GGTACAATCA ACTCGCTTTG
GCCTTTGCAA CATCACGTGT GCTCAACAAG CTGGGAATTA AATTTGCCAT GCTTGGCGAA
GAGGAATGGT GTTGTGGCTC AGCCCTTATC AGGACAGGCC AGGTGCATGT TGATGATGTG
GCCCGTGAAC TTGCAAGACA CAATGTAGAG GCACTCCAGA AAAAAGGTGC TAAAAAGGTT
TTGTTTGCAT GTGCAGGCTG TTTCCGTGCT GCAAAGATCG ACTGGCCCAG GCTTCTTGGC
AAAGAACTGC CTTTTGAGGT TATTCACATT ACACAGTTCC TTGCAGACCT GATACAAGCG
GACAAGATTA AATGGGAAAA GCCAATCAAC AAGACAATTA CCTATCACGA CCCCTGCCAC
CTTGGCCGCC ACGTTGGCGT CTTTAATGCT CCCAGGTATG TGCTTTCCCA TATTCCGGGC
GTTAAGTTCG TTGAAATGGA CAGGTCAAAG GAATTCCAGC GTTGTTGTGG AGCTGGCGGT
GGTGTAAAAG CAGGAATGCC TGACCTTGCT GTGGCAATGG GAGAGTCCAG AGTTAAGGAC
GCTCTTGAAA CCAATGCAGA TATCCTCTCG AGTGCGTGCC CCTTCTGTAA GAGGAACCTC
TCGGATGGCC GTGATGCTCT CAAATCTGAT ATTGTTGTAG AAGACATCAT CGAGCTAGTT
GCAGAGGCTC TTGGCCTTAG TACCTCATAA
 
Protein sequence
MAKRTPSIDT KNLTAVQLME LDACVRCGEC VKWCPTYAAS GGKPGLAPRD KILRWRQYMN 
KSYGLKAKLF GPQEVSPSEL EEFKDDVHGC TTCGVCATVC EAGINTVEIW EAIRTNLVKK
GIGPYGKQSA FPKLVGQYHN PYMKDQKDRL AWVPPDVKIE DKADIVYFTG CTAGYNQLAL
AFATSRVLNK LGIKFAMLGE EEWCCGSALI RTGQVHVDDV ARELARHNVE ALQKKGAKKV
LFACAGCFRA AKIDWPRLLG KELPFEVIHI TQFLADLIQA DKIKWEKPIN KTITYHDPCH
LGRHVGVFNA PRYVLSHIPG VKFVEMDRSK EFQRCCGAGG GVKAGMPDLA VAMGESRVKD
ALETNADILS SACPFCKRNL SDGRDALKSD IVVEDIIELV AEALGLSTS