Gene Mbar_A1567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1567 
Symbol 
ID3625343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1929991 
End bp1930797 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content45% 
IMG OID637700449 
Producttranslation initiation factor IF-2 subunit alpha 
Protein accessionYP_305094 
Protein GI73669079 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1093] Translation initiation factor 2, alpha subunit (eIF-2alpha) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAACG ATAACTGGCC CGAAGTCGGA GAATTTGTTG TCTGTACTGT AAAGAATGTG 
ACGGATTTCG GAGCCTATGT CGAGCTTGAG GAGTTCGGAG GAAGAGAAGG ATTTATTCAT
ATCTCCGAAA TTAAAGCAGG CTGGGTCAAG TACGTCAGGG ACTACGTAAG GGAAGGGCAG
AAGATAGTCT GCAAGGTTCT TAACGTGGAC CCTTCCCGCG GCCACATCGA CCTTTCATTG
AAAGATGTAA ACGAGCACCA AAGGCGCGCT AAAATCCAGG AATGGAAAAA TGAACAAAAA
GCCGCCAAAT GGCTCCAGTT CGTGGCTGAA GAGACAAAAA CCGATGAGGA TAACCTGCAA
ACTTTGCACG AAAAACTCGT AGAAGAGTTC GGAAGTGCAT ATACAGCCTT TGAAGAAGCT
GCCATCGAAG GGGAAAAAGC CTTCAAAGGA GTCAAAGTCA ATAAGAAGTA CTTAAAAAGC
ATAATCAAAA TTGCAGGGGA AAACATCAAA CTGCCTTTTG TAGACATTGC AGGTTATGTG
GACCTGACCT GTGACCTTCC AAACGGCATA GAAGTCATAA AGCAAGCTCT TAGTGCTGCA
AACTCTATCA ATGACGTTGA TGAAAAAGAC ATAAGGCTCG AAATAAGTTA CACAGGGGCT
CCAAGATACC GAATTAAGGT AATTGCCCCG GACTACAAGA AAGCTGAATC AGTCCTTAAA
AAATCTGCCC AGACAGCAGT CGATAATATT ACCAAACTTG GCGGACATGG GACTTTCAAG
CGGCATATCG AATCGGCAAA GGCGTGA
 
Protein sequence
MGNDNWPEVG EFVVCTVKNV TDFGAYVELE EFGGREGFIH ISEIKAGWVK YVRDYVREGQ 
KIVCKVLNVD PSRGHIDLSL KDVNEHQRRA KIQEWKNEQK AAKWLQFVAE ETKTDEDNLQ
TLHEKLVEEF GSAYTAFEEA AIEGEKAFKG VKVNKKYLKS IIKIAGENIK LPFVDIAGYV
DLTCDLPNGI EVIKQALSAA NSINDVDEKD IRLEISYTGA PRYRIKVIAP DYKKAESVLK
KSAQTAVDNI TKLGGHGTFK RHIESAKA