Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1562 |
Symbol | |
ID | 3625979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 1924509 |
End bp | 1925714 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637700443 |
Product | formate dehydrogenase, beta subunit (F420) |
Protein accession | YP_305089 |
Protein GI | 73669074 |
COG category | [C] Energy production and conversion |
COG ID | [COG1035] Coenzyme F420-reducing hydrogenase, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAACCGT CAGAAGGAGA TATGTTTTAT GTCCAGGCTT GTGACCAGAA ATTACTGGAA AAAGGTGAGT CAGGCGGTGC GGTTTCAGCT CTATTGAAAT TTGCACTGGA AAGCGGAAGT GTGGACGCAG TGCTCGGGGT CAGGAAAGGA GCCGACATCT ATGATGCTGT ACCTGTGTTG ATTACGGACC CGGCAGAAAT TTCGGAAATT TCGGGTTCCC TGCATTTCGG GACCCTTCTT CTGTCCAGAC TTTTCAGCAA GTACCTGGAA AAGGCAGATA ACCTGAAAAT TGCAGTCTCC CTGAAAGGAT GCGATGTCAT GGGTCTTTAT GAGCTTGCAA AGCGGGGAGA AGTCAGGCTG GAAAATATCC TCATGCTTGG GCTAAACTGC GGAGGCTCAA TCAGTCCGGA AATGGCAAGG AAGATGATTG TAGAAACATT TTCAGTTAAC CCTGACTCGG TTAAAAAGGA AAGGATTGCT AAGGGGAAGT TTATCGTTGA AACTCCTGAA GAGGAGTTTT CTATACCCAT AGACAAATTG GAAGAGGCAA ACTTTGGAAG AAGAAGTAAC TGCAGGCGCT GCAAACTGAA AATCCCAAGG CAGGCTGACC TTGCCTGTGG AGAATGGGGC GTTATGGGTA TGGAAGCAAC CTTTGTTGAG GTATGCAGTG CAAAAGGCGC AGAACTACTT AAACAGGCAA AAACTGCAGG CGTGGTTGAA ACTTTTCCTC CTGTCCCAAA AGGGGTGGAG ATTCGGGGGA AAATCGAGAA GTCGATGCTG AAGCTGGCCG AGGGCTGGAG AGAGAAAGAT TTTCAGTCGT TAGGGGAGGG AAAAACCCGC CTGAAACAGC TTGTGGATGA GACTTCACGT TGTATCAAGT GCTATACCTG CATTGAAGTA TGTCCTGCCC TGTCCGGGAC AAAAGTATCA GACTTTACTA TCACCCCTGG AAAGGTTCCT CCTTCCTTTG CCTTTCATGC ACTACGATAT TCCCTTGTTG CAGATTCCTG TATCAACTGC GGACAATGCG AAGAACTCTG CCCAATGGAT ATCCCAAATG CCCTTTTTAT GCATTCCTTT GCTGTGGAAT TTCAGGAACT CTACGGCTAT CAGGCAGGGC AGGACCTTTC AGTCCCGAAT ATCTCACCAT TGGAAATTTT CCGGCAGAAA GAAAACAGGA AAAAATTAGG TTGTAAAAAA AATTGA
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Protein sequence | MKPSEGDMFY VQACDQKLLE KGESGGAVSA LLKFALESGS VDAVLGVRKG ADIYDAVPVL ITDPAEISEI SGSLHFGTLL LSRLFSKYLE KADNLKIAVS LKGCDVMGLY ELAKRGEVRL ENILMLGLNC GGSISPEMAR KMIVETFSVN PDSVKKERIA KGKFIVETPE EEFSIPIDKL EEANFGRRSN CRRCKLKIPR QADLACGEWG VMGMEATFVE VCSAKGAELL KQAKTAGVVE TFPPVPKGVE IRGKIEKSML KLAEGWREKD FQSLGEGKTR LKQLVDETSR CIKCYTCIEV CPALSGTKVS DFTITPGKVP PSFAFHALRY SLVADSCINC GQCEELCPMD IPNALFMHSF AVEFQELYGY QAGQDLSVPN ISPLEIFRQK ENRKKLGCKK N
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