Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1546 |
Symbol | |
ID | 3625260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 1906776 |
End bp | 1907972 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637700427 |
Product | aspartate aminotransferase |
Protein accession | YP_305074 |
Protein GI | 73669059 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.623747 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTTCAA TAAATTCCGA ATGCGTCTTA TCAAAAAAAT CTGAAGATAT CCCCCCTTTC TATGTGATGG AAGTGCTGGA AAGTGCCCAG GCTCTGGAAG CTGAGGGAAG ACACATAATC CACCTTGAGG TAGGAGAGCC TGATTTCCCT ACAGCTCCCC ATATCTGTGA CGCTGCTTGT GCTGCTATTG GCCGGGGAGC CACAAAATAC ACTCACAGTC AGGGACTTCC TTCGCTCAGA GAGGCAATAG TCGAATCTTA CCAGCAGAAG TTCGGAGTCG AACTGAGTCC GGATCAGGTG ATTGTAACAT CCGGCACAAG TCCGGCTCTT TTGATTGTTT TTATGGCTCT GCTTGAGAAA ATGGACGAAG TCATAATGTC GAACCCCCAT TATGCCTGCT ATCCGAACTT CGTGAAATAC CTGGGTGGAA CTCCTGTTTT TGTTTACACG AGTGAAACAA ACGGGTTTGC CCTAGAACCG AAAACTGTAA GGCAGTGCTT GAGCCCTAAT ACAAAAGCTA TCCTGATTAA TAGTCCTTCA AATCCTGGAG GGCATGTCAT GTCTCCGGAA AACTTACAGG GACTTGCCAA GATCGCGGAT GAAAAAAGAA TTCCTATTGT TTCTGACGAG ATATACCAGG GTTTGATTTA TGGCGGGGAC GAGCATACTA TTCTGGAATA CACAAAGAAC GCCTTTGTCC TTAATGGCTT TTCCAAATTA TATGCTATGA CCGGCTGGAG GCTCGGCTAT ATTATCTGTC CTCCTGAATG CGTTCGTGCA ATTCAGAAAA TTCACCAGAA CTTTTTCATC TGCGCCAATT CCTTTGTCCA GGAGGCAGGA ATCGCAGCTC TTAAAGGTCC GCAGGATCAC GTCGACGAGA TGGTCCATAC TTACAACAAA CGCCGCCAGT ACATGTTGAA AAGGCTTATC GGAATGGGCC TTGAAGTCCG CAAAGAGCCG ATGGGGGCCT TTTATGTTCT CGCTGATGCT CGCAGGTACG GCCCTGACTC CCTGGAAATG AGCCGCCGTA TCCTTAACGA AGCCGGCGTT GCAGTTACAC CCGGAATCGA TTTCGGAAAC GGGGCTGAAG GTTATCTTCG TTTCTCCTAT GCTAACAGCA TCGAAAACAT AAAAGAAGGT ATGGACAGGT TGGAAGCTTT TTTGGAAAAA GAGCTTGAAG GGTTAGAAAT TCTATAA
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Protein sequence | MFSINSECVL SKKSEDIPPF YVMEVLESAQ ALEAEGRHII HLEVGEPDFP TAPHICDAAC AAIGRGATKY THSQGLPSLR EAIVESYQQK FGVELSPDQV IVTSGTSPAL LIVFMALLEK MDEVIMSNPH YACYPNFVKY LGGTPVFVYT SETNGFALEP KTVRQCLSPN TKAILINSPS NPGGHVMSPE NLQGLAKIAD EKRIPIVSDE IYQGLIYGGD EHTILEYTKN AFVLNGFSKL YAMTGWRLGY IICPPECVRA IQKIHQNFFI CANSFVQEAG IAALKGPQDH VDEMVHTYNK RRQYMLKRLI GMGLEVRKEP MGAFYVLADA RRYGPDSLEM SRRILNEAGV AVTPGIDFGN GAEGYLRFSY ANSIENIKEG MDRLEAFLEK ELEGLEIL
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