| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1501 |
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| Symbol | |
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| ID | 3627688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 1857822 |
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| End bp | 1858448 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637700389 |
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| Product | dimethylamine corrinoid protein |
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| Protein accession | YP_305036 |
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| Protein GI | 73669021 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5012] Predicted cobalamin binding protein |
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| TIGRFAM ID | [TIGR02370] methyltransferase cognate corrinoid proteins, Methanosarcina family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000126339 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTTCAGG AACTTGCAGA TGCTATAATT TCCTGCAAGA AGGATACAGT ACTCGCTGTA
GTTGAAAAAT CTAAAGGAGA ACTGGAACCT TCCGAAATAA TAGAAAAAGG ACTTGCAGCA
GGCATGAATG AGGTTGGTGT CCGTTTCGAG AGAGGAAAAC TGTTCCTGCC GCATGTGATG
ATGGCTGCCG ATGCGATGAC TGCAGGAGTT GCAGCTCTTA AGGATCTTAT GCCTGAAGGG
GCTTCCGGCT CAAAGCTCGG TGTTATTGTG AACGGTACCG TAGAAGGTGA TGTTCATGAT
ATTGGAAAGG CAATCGTGTC CACAATGCTC CAATCTGCCG GCTTTGAAGT ACATGATATC
GGCCGTGATG TTCCAATCAG GAACTTTATT GAGAAGGCAA AGGAAGTCAA TGCTGATATG
ATTGGAATTT CCGCTCTTAT GACCACAACT CTTCAGGGAC AGAAAGGTGT AATTGAGCTC
CTTAAAGAAG AAGGACTCAG AGATAAAGTA AAAGTCATGG TAGGCGGTGC ACCTGCAACC
CAGGCCTGGG CTGACAAAAT CGGTGCAGAC TGCTATGCTG AAAATGCAAC CGAGGCTGTT
ACAAAAGCAA AAGAGTTGCT GGCTTAA
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| Protein sequence | MLQELADAII SCKKDTVLAV VEKSKGELEP SEIIEKGLAA GMNEVGVRFE RGKLFLPHVM
MAADAMTAGV AALKDLMPEG ASGSKLGVIV NGTVEGDVHD IGKAIVSTML QSAGFEVHDI
GRDVPIRNFI EKAKEVNADM IGISALMTTT LQGQKGVIEL LKEEGLRDKV KVMVGGAPAT
QAWADKIGAD CYAENATEAV TKAKELLA
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