Gene Mbar_A1467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1467 
Symbol 
ID3627748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1802032 
End bp1802811 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content48% 
IMG OID637700355 
Productdihydroorotate dehydrogenase electron transfer subunit 
Protein accessionYP_305004 
Protein GI73668989 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0370735 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCCTC TTAATGCTAC AATAGTACAG ATAAATGAAG AATCTCCTTT GGTCAGGACT 
TTCTTCTTTG ATTTCCAGTT TGAGACTATG GAGCCCGGCC AGTTTGTAAT GGTCTGGGTC
AGAGGTGTGG ACGAAGTGCC CATGGGCCTC TCGAGCAAGA ATTCCATAAC TGTCCAGAAA
GTGGGAGAGG CAACTTCAAA ACTTTTTGAG TTGAAAGAAG GGGATTCTTT CGGGCTCAGA
GGTCCTTTTG GAAAGGGCTT TTCCCTGCCT TCAGAGGGAG AAAAAACTCT GATTATTGCA
GGCGGGGTTG GAGCTGCTCC CCTTGCTCCT TATGCCGAGG CAGCGCGGAG TGCAGGCTCG
GAAGTTCATA CGGTGCTTGG AGCGCGAAGT GCAGGCGACC TACTTTTTGA GAAGCGATTT
GCAGAAGCAG GGAAGGTCTA CATTTCTACG GATGACGGCT CAAAGGGAAC AAAGGGTTTT
GTGACTGATG TGCTCACTGA CCTCGACCTT TCGGTTTATG ACAGAATTGC AGTCTGCGGG
CCGGAAATAA TGATATCTTC GGTTTTCAGA CTCCTTAAAG ACAGACAGGT TCTTGAAAAG
TCTGAGTTCA GCCTTCAACG TTATTTCAAA TGCGGTATAG GAGTCTGTGG GGCATGCTGT
ATAGACAAGT CTGGGCTCAG GGTTTGCAGG GACGGACCTG TGTTTTCAGG TGTGCAGCTC
CTGGATTCCG AACTGGGGAA ATATGCAAGG GATGCCAGTG GGCGAAGAGT TAAAATTTAA
 
Protein sequence
MLPLNATIVQ INEESPLVRT FFFDFQFETM EPGQFVMVWV RGVDEVPMGL SSKNSITVQK 
VGEATSKLFE LKEGDSFGLR GPFGKGFSLP SEGEKTLIIA GGVGAAPLAP YAEAARSAGS
EVHTVLGARS AGDLLFEKRF AEAGKVYIST DDGSKGTKGF VTDVLTDLDL SVYDRIAVCG
PEIMISSVFR LLKDRQVLEK SEFSLQRYFK CGIGVCGACC IDKSGLRVCR DGPVFSGVQL
LDSELGKYAR DASGRRVKI