| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1431 |
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| Symbol | |
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| ID | 3627468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 1760876 |
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| End bp | 1762447 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637700321 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_304970 |
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| Protein GI | 73668955 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0875304 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTAT TAGTCAGCGA CTCACTCTCC AATGAAGGTT TGGAGATTCT AAAAGAACAC
TTTAAGGTTG ATGTTTCCAC CGGGCTTTCC GAAGATGAGC TGGTGAAAAA AATTAAGGAT
TACGATGCTC TTGTAATACG CAGCGGTACC CATGTTACTC AGAAAATAAT CGAAGCTGCC
GACAACCTGA AAATTATCGG GAGAGCCGGA GTCGGAATTG ACAATGTTGA TGTGGATGCA
GCTACAAAGA AAGGCATTAT TGTGGCTAAC TCTCCCGAAG GCAATATGAT TTCGGCAGCA
GAGCACACAA TTGCTATGAT GATGGCAATG TCCAGGAACA TCCCCCAGGC AAATGCCTCC
CTTAAAGGCA AGGAATGGAA ACGTAGTAAA TTCACAGGTG TCGAGGTCAA AGGTAAGACC
CTAGGAATCA TAGGTCTCGG AAGAATCGGT TCCGAAGTCG CAAAAAGGGC TTCCGGACTT
GAAATGAACC TGATGGGGTA TGATCCATTT GTTTCTGAAA AGCGGGCTAT TGAGCTTGGT
GTCAAGCTGG CAACAGTTAA CGAAATCGCA AAAGAAGCCG ATTACATCAC AGTGCACACT
CCTCTTATAA AAGAAACCAG AAACATTCTT GATGAAGAGC AGTTTGCCCT GATGAAGCCT
ACAACCAGAA TTCTCAACTG TGCCCGCGGC GGCATTATCA ACGAAGAAGC TCTGGCAAAA
GCTCTTGAAA GCGGAAAAAT AGCCGGTGCA GCAATAGACG TTTTCATTGA GGAGCCTCCT
TTTAACAGCC CTCTTCTGAG CTTTGACAAT GTTGTAGTAA CCCCTCACCT TGGTGCTTCT
ACAAAGGAAG CTCAGGTCAA TGTGGCAGTA GATATTGCAA AGGAAGTAGC GTCTGTCCTT
ACAGGTGGAC CTGCAAAGAA CGCAATCAAT ATCCCCTCGG TAAAGCCGGA AGCTATGGCA
GTCCTTGCCC CTTACATCAG GCTCTCAGAA ATTATGGGTA AGATTGCAGG GCAGCTCGTA
GACGGAAACT ACGAAAAAGT CGAAATCGGA TATAACGGAG AGATTTCCGG AAAGGATACA
AGGCCTCTTA CAGTCTCGGC TCTCAAAGGA CTGCTTGAAA TGGCCCTCGG TTCCGGAGTA
AACTATGTCA ATGCTCCCAC TCTTGCAAAG TCCAGAATGA TTGCAGTCGT GGAAAGTAAA
TCCGAATCTT CTGAGGAATA CTCTTCAACT ATCAGTATCA AACTTAGCAG CAACGGCAAG
GAAAAGCTGG TTGCAGGTAC TGTTGTCGGA GACGATCCAA AGATCGTCGC AGTCGATGAT
GACAGAGTAG ATATCTTCCC TGCAGGCCGT ATGATTTTTG CCAAACATAT CAACAGGCCC
AACGTTATCG GACCTTGCTG CATGGTACTC GGTAAAAACA ATATCAATAT CTCAGGCATG
CAGGTTGGCA GATCAGAAAT AGGAGGCGTG ACCATGATGG TTCTTAACAT AGACTCCGAA
GTTTCTGACC CAATCCTTGA GGAAGTCCGG AAAGTCGATG GAATCCTGGA TGCCAAACTT
GTGACACTCT AA
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| Protein sequence | MKVLVSDSLS NEGLEILKEH FKVDVSTGLS EDELVKKIKD YDALVIRSGT HVTQKIIEAA
DNLKIIGRAG VGIDNVDVDA ATKKGIIVAN SPEGNMISAA EHTIAMMMAM SRNIPQANAS
LKGKEWKRSK FTGVEVKGKT LGIIGLGRIG SEVAKRASGL EMNLMGYDPF VSEKRAIELG
VKLATVNEIA KEADYITVHT PLIKETRNIL DEEQFALMKP TTRILNCARG GIINEEALAK
ALESGKIAGA AIDVFIEEPP FNSPLLSFDN VVVTPHLGAS TKEAQVNVAV DIAKEVASVL
TGGPAKNAIN IPSVKPEAMA VLAPYIRLSE IMGKIAGQLV DGNYEKVEIG YNGEISGKDT
RPLTVSALKG LLEMALGSGV NYVNAPTLAK SRMIAVVESK SESSEEYSST ISIKLSSNGK
EKLVAGTVVG DDPKIVAVDD DRVDIFPAGR MIFAKHINRP NVIGPCCMVL GKNNINISGM
QVGRSEIGGV TMMVLNIDSE VSDPILEEVR KVDGILDAKL VTL
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