Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1411 |
Symbol | |
ID | 3627056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 1739307 |
End bp | 1740218 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 637700300 |
Product | hypothetical protein |
Protein accession | YP_304950 |
Protein GI | 73668935 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00357704 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0994638 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAATT ACACAAACAA AAAATCTGTT TTTAGAAATT TTGATCGATT AGATTTTTAT TTGATTACAT TATGTATTTT ATTTACTCTT TTAATCTTTT TATTATTCAC CAACTCATCA ATGCCTCCTT TTGAAGACGC TGCGATGTTA ATGCGATATT CACAAAATTT TGTATATGGA CATGGAATAG TATGGAATAT AGGCGAACAT CCTGTAGATG GAGCGACTGA TTTCTTATTT ATGATTTGCG TAGCTATAAC AGCAAAAACA GGACTTTCAA TTGAAAATTC AGTACTTTTA ATTGATATGA GTTCTCATAT ATTAACAGGA ATCATAATAT ATATATTCAT TCGAAAATTT TTATTTGCAG GTAGATGGAT GGCTTTTACT TCTTTATTAT TTTTTATATT AGGGACTGGA CTTATATACA CAGCTGTATT TTTTGGAACT CCTTTTTTTG CATTGTTTTC GGCAATTACA TGGTTTTGTG CAAATGAAGC AGTTATAGAT CCAAAATATT CCAATTCACT TATATTTTCG GTTTCTGGTT TAATATTAGG TTTGATTAGA CCAGAAGGGG TATTTCTAGC TATTTTTATG TTAATTGCTA TTCTATTTAA AATTGGATTT AAAAAATCAA AAAAAATTGT ATTATCATTT TTGATAATTT TTGGGATTAT TGGCAGCATT TACTTTATAT GGAGATGGGG ATACTTTGGT TATCCACTTC CTAATCCTTA TTATAAAAAA GGTGGTTTTA CTCTTCACCT CAGGGGATTA ACTCAATCAA TAGGTACGTT TGTTATATTT TCTTATCCTT TTATTCCTGC ATTTATTTTA GGTGGGAGAT CCAAAGAAAA TCTACAGCAA ACAATATTCT CTTTGATACC AGTAATTGGA TTTATACTAT AG
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Protein sequence | MTNYTNKKSV FRNFDRLDFY LITLCILFTL LIFLLFTNSS MPPFEDAAML MRYSQNFVYG HGIVWNIGEH PVDGATDFLF MICVAITAKT GLSIENSVLL IDMSSHILTG IIIYIFIRKF LFAGRWMAFT SLLFFILGTG LIYTAVFFGT PFFALFSAIT WFCANEAVID PKYSNSLIFS VSGLILGLIR PEGVFLAIFM LIAILFKIGF KKSKKIVLSF LIIFGIIGSI YFIWRWGYFG YPLPNPYYKK GGFTLHLRGL TQSIGTFVIF SYPFIPAFIL GGRSKENLQQ TIFSLIPVIG FIL
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