Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1360 |
Symbol | |
ID | 3627433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 1675950 |
End bp | 1677077 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637700250 |
Product | hypothetical protein |
Protein accession | YP_304901 |
Protein GI | 73668886 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGTTT GCGTAGCGAG CAGAAGCTCT GCATTCTTCT TTTATCAGTC GTCTTTAAAT CTCATAAACT ATCTACTACT CCTGATCGAC GTGGCACGGA GAAAACAATT TGAGAAGCCC CTGCATGGGG ATAAGGAAAG CCTGCGCTTT GCGACCCCTG AGCCAATTGC CCGCTACAGG GCGCAGCGTT TGAGATGTAA AATTCTGGCT GACATAAGCT GTGGGATAGG AGGGCAAACC GTCTTTTTTG CCCAGCAGTG CGAGTTCGTG TATGCAGTGG AAATCGACCC CAAAAAAATC GAGTATGCAA AACAGAACTG CGCAATGTAC GGGCTTGACA ACGTGAAATT CATTTGCGGG GACGCTCTTG ACCCGAAAGT CATAGAGCAA ATCCCGGCCG TTGACGTAAT CTTTTCTGAT CCCTTCCGCC CGGCCGAAGA AAGCGAAAGG CATGTCTCAA GCCTTGAGCC TGGAATTCCG AATGTACTGG CTGCTTACGG TGAAAAAACC CGAAATTTTG CTTTTGAAGC TCCGCCCCAG ATGCCGCCTG AAAGGATTCC TTTTGACTGC GAAAAAGAAT ACATCTCTCT GGACGGGCAG CTCAACCGCC TAACCCTTTA CTTCGGCGGG CTGAAGCAGT ATGACCGGAT GGCTGTGGCT CTGCCTGCAG GCGAAGGACT GGTTTCAAAA TATGGGCTCT CGCAGGTAAG GGAAACTGAC AAAATGAAAC TTAACGCCTA CGAGCCTGAA CCATCGGTAG TTGCAGCCGG ACTGCTGCCT GAGCTTGTGG AATCCATGAT GCAGATGGCA GGGCCTCTTA TGGGAGGTTT TGAGCTTTTC AGGGTTGACA ATAAAAGGCT TTTATTGACC TCGGATGCCC TGATAAAACA GTCCATGATC AAAAATCATT ACCTTGTACT GAAGATCTGC CCCTTTGAAC CAAAAGAGAT CAATAAATTC TTAAAAGGCC AGAATATCGG GAGTGTTGTA CTCAGGGCAG GAGTAAAGCC CGAAGAATAC TGGGAAGTGC GTAACGAGGT TGAAAAAGGC CTTGAAGGAA ATAAAACCGT GCATCTCTTT GTAAAAAATG GGACTGCAAT TCTTTGTGAA GTTATCTTTA ATGATTGA
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Protein sequence | MSVCVASRSS AFFFYQSSLN LINYLLLLID VARRKQFEKP LHGDKESLRF ATPEPIARYR AQRLRCKILA DISCGIGGQT VFFAQQCEFV YAVEIDPKKI EYAKQNCAMY GLDNVKFICG DALDPKVIEQ IPAVDVIFSD PFRPAEESER HVSSLEPGIP NVLAAYGEKT RNFAFEAPPQ MPPERIPFDC EKEYISLDGQ LNRLTLYFGG LKQYDRMAVA LPAGEGLVSK YGLSQVRETD KMKLNAYEPE PSVVAAGLLP ELVESMMQMA GPLMGGFELF RVDNKRLLLT SDALIKQSMI KNHYLVLKIC PFEPKEINKF LKGQNIGSVV LRAGVKPEEY WEVRNEVEKG LEGNKTVHLF VKNGTAILCE VIFND
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