| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1352 |
|---|
| Symbol | |
|---|
| ID | 3627425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 1666575 |
|---|
| End bp | 1667273 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637700242 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_304893 |
|---|
| Protein GI | 73668878 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00554372 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCCAG AAAATATTAA GCTCAAAACT CTTGAAATGA CCTTTGAAGG CTCAGAAGAG
TTCAGGGGGG ACGCAAATCA GATACGTGGT TTCTTTGCGT CAAAATTCAA TGAATACGAT
CAGCTCCACA ACCATAACAC TGACAGATAT TATTACCGTT ACCCTCTTGT GCAGTACAAA
GTTCTTGATA GGATGCCGCT AGTGGTTGGT ATAAATGAAG GAGCAGAAAT TTTAAAATGT
TTATTTGATA AATTTGATAC GGTTACTCTT CCTCATGAGG ACTTTGAAAT CACTGAAAGG
TCTCTGAGGC TTAAAAAACA GGATTTTGGC CTCACAAAAA ACCTCTACTT TTACGAATTT
CTCACTCCCT GGCTTGCCCT TAATAAAGAA AATGAAGAAA AGTTCTTTGA GACCAGAAAG
ACTGAAGAAA AAAAGGAAAT CCTCAGGAAG ACGCTTGTAG GAAATTTGCT TTCCATGTCA
AAAGCTTTTG GATATACGGT TCCTGATACC ATAAAATGCG ATGTTGATGT GGAAGTCAGA
TGTTCAAAGT ACAAAAATAT GGATTTTACT TCTTTTACAG GCGGTTTTAT AGCTAATTTT
TTGATCCCGG ATTTTATGGG AGTGGGAAAG GGGGTTGCTA AGGGGTTTGG GACTGTGAGG
AAAATAACAG AAAATCGAAG GAAATTGGAA TCATTATAA
|
|---|
| Protein sequence | MTPENIKLKT LEMTFEGSEE FRGDANQIRG FFASKFNEYD QLHNHNTDRY YYRYPLVQYK
VLDRMPLVVG INEGAEILKC LFDKFDTVTL PHEDFEITER SLRLKKQDFG LTKNLYFYEF
LTPWLALNKE NEEKFFETRK TEEKKEILRK TLVGNLLSMS KAFGYTVPDT IKCDVDVEVR
CSKYKNMDFT SFTGGFIANF LIPDFMGVGK GVAKGFGTVR KITENRRKLE SL
|
|---|
| |