Gene Mbar_A1348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1348 
Symbol 
ID3627421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1663707 
End bp1664276 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content42% 
IMG OID637700238 
Producthypothetical protein 
Protein accessionYP_304889 
Protein GI73668874 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.244032 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.420719 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGACA ATTTTAAAAA TATATATCAG TTTAAGATTT CAATGAAAGG CATAACTCCT 
CAGATCTGGC GGCGAATCCA GGTGCCGGAA AATTATACTT TTCTGGACCT TCATGATGCT
ATTCAGGCTG CAATGAATTG GGATGATTAC CATTTGCACG AATTCGAAAT GCAAAACCCA
AAGACCGGGA TGTTTGACAG AATCGGGACA AAAGATGAAG ATTACGATGC TTTCAGTGAC
GAGCCTCTTG TACCGGAAAA TAAAGTTAAA CTCTCCAAAT ATTTTACGCT GGAAAATAAG
GTTGCTACGT ACAGGTACGA TTTTGGGGAC AACTGGCATG TAAAAATCCG GCTTGAAAAA
ATCCTTCCGA GAAAAGAAGG AGTGAAATAT CCTGTCTGCA CTGCAGGAAA AAGAGCAGCT
GTTCCCGAGG ACATTGGAGG AATAGGGGGC TATGAAAATA TGCTGGAGAT CCTGGAAGAC
CCCGAAAACG AGGAATATGA AGACACAGTG GAATGGCTGG GCGAAGATTT TGACCCCGAA
TACTTCGATC CAAACGACAT TGCTTTCTGA
 
Protein sequence
MKDNFKNIYQ FKISMKGITP QIWRRIQVPE NYTFLDLHDA IQAAMNWDDY HLHEFEMQNP 
KTGMFDRIGT KDEDYDAFSD EPLVPENKVK LSKYFTLENK VATYRYDFGD NWHVKIRLEK
ILPRKEGVKY PVCTAGKRAA VPEDIGGIGG YENMLEILED PENEEYEDTV EWLGEDFDPE
YFDPNDIAF