Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1296 |
Symbol | |
ID | 3627705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 1605712 |
End bp | 1606458 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637700186 |
Product | hypothetical protein |
Protein accession | YP_304839 |
Protein GI | 73668824 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2230] Cyclopropane fatty acid synthase and related methyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0615608 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.430138 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGGGA AGAATGAAAA AAAATTATCC AAACTAAAAG ATTTCTGGGT AGAATTTTTC GCAGATCGGA AAGACGGCGG CCACAGATCT TCAGATGAGG AATTTATTTC CCTGGAAGCT AAGGAAAAAC TATTCCATCT GGATGGGGGC AAAACCCTGC TTGATTTTGG ATGCGGTGCC GGTGAGCTCC TGGTTTACTA TGCACCGGAA TATAAACAGC TCGTAGGAGT TGATTTTTCC GCATCCATGC TTGATGAAGC AAGCAAAAAA ATCAGGGAAA GAAAATGTGG GAATATATCG TTAATTCAGG CTGATGATAA AACTGTCTGG GACAAACTGG AATACTCTTT TGATCGGATA ACCGCAGCTG GAGTGATTCA GTATTTGACA TTGCAAGAAA TTGATAACTT TATCTTTAAC GCGTCAAATT ACCTTAATAA AGGGGGTAAA ATAGTGTTGT TTGATATACT GGACCCCCGC TTATATCCAT TATGGAAAAT AGGGCTGTTT TCACAAGATG CAGGCTTCGG GAAAATATTA CGCAAAGTCG GGTTTGAGTT TAAGGTTATA TTATCGGCAA GCTTGAGTAA TCGACCAAGA GATATTCTTG GGTTTGCTCA CAACCCCTAT GCAATTAAAA AGATAGCAAA TAGATATGGT TTTGAAACTA TTTTTGTAAA ATCAATGTAT TACGAGTACA AGTATCATGC AATAATATCT CGAACTTCAG AGTCTCGGGA GTTTTAA
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Protein sequence | MPGKNEKKLS KLKDFWVEFF ADRKDGGHRS SDEEFISLEA KEKLFHLDGG KTLLDFGCGA GELLVYYAPE YKQLVGVDFS ASMLDEASKK IRERKCGNIS LIQADDKTVW DKLEYSFDRI TAAGVIQYLT LQEIDNFIFN ASNYLNKGGK IVLFDILDPR LYPLWKIGLF SQDAGFGKIL RKVGFEFKVI LSASLSNRPR DILGFAHNPY AIKKIANRYG FETIFVKSMY YEYKYHAIIS RTSESREF
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