| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1284 |
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| Symbol | |
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| ID | 3627771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 1590414 |
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| End bp | 1592051 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637700174 |
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| Product | oligopeptide ABC transporter, solute-binding protein |
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| Protein accession | YP_304827 |
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| Protein GI | 73668812 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000669385 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATA AAAACTTCCC CTTGATTATA TTGTTAATTA TCCTGCTGAC CTGCGCTATC
CTGACGACTT CCGGGTGCAG CAGTACAGAA GAAAGTGGAG CAAAAGACGC AGTCTCCGGG
ATGGAGGTTA ACTCAGGATC AGATGATGCT TCCCAGATAG AAGGAGGCTC TGAAAATAAT
ACACTTGTAC TTGGTGAAAT GTGGAATATC GAATCGATTG ACCCAATTAA TGGGGATGGC
ACCCTTGTCT GCGAGAAAGC TGCAATAACC GAAACTCTTG TTGGTGCCAA TGACGATTTC
TCGCTCAAAC CTGGGCTTGC AACTTCCTGG GAACAGCTTG ATGAAAATAC CTGGGAATTT
AAGCTGAGAA ATAATGTTAC CTTCCATGAC GGAAGCAAAA TGACTGCAGA AGACGTAAAT
TTCACTCTGG AAAAAGTCAT CTCGGAAAAC GCGAAAGTTG CTTCCATGCT AAAAATAGAT
TCGATAGAAA TAGTTGACAA CTATACTCTT AAAATCAAAA CCAAAGAAAT AAACCCTATC
CTTCCTGGAG TTCTCCATTA TCCTGATACT GCTATAATAA GTCCCTCTTC TTATAATGAA
AATGGAGAGT TTGTAAAACC TGTAGGAACG GGTCCATATA AATTAGAATC ATTTGACGAA
CAGACCAGAG TTCTGACAGT TGTAAAGAAC GATAACTGGT GGGGAGGAGA AGTAGGGCTT
GATAAAATGA TCCTTAAGGG AATACCAGAC CCCAACACGA GAGCAATGGC GATCGAAAAT
GGAGAAGTTG ACTTTACCGT CGATGTACCC TATAGTGAAA CTGACAGGAT TGACGCTATA
GACGGCATTA ACGTAGAGAA ATACAAAACC CCAAGAGTCT ACAAACTTGA CCTGAACCTG
AAACATGAAC CCCTTGAAGA TGTTAGAGTA AGGCAGGCTA TGTCCTATGC CATTGACAGG
TCTGACATCG CAGAAAATGT ACTGTACAAT GTAGGAGAAG CTGCTGCAGG TCCTTTCCTG
CCCACAATGG TCTGGGCAAA TAAGAGCCTG AAACCCTACA GCCAGGACCT TGAGAAAGCT
GATGAGCTCC TTACAGCTGC TGGCTGGGTG GATACTGACG GAGACGGCAT CAGGGATAAG
GATGGACAAC CTCTCAAGTT CAACCTGATG ACCTATTCGG CAAGGCCTGG ACTTCCTCCA
ATGGCTGAAG CTATGGCTGC CCAGTTAAGG GAGGCAGGCA TAGGCATAGA GACAGAAGTT
CTGGAAATGG GGTCAATCGA TGACAGAAGG GAAAGCGGAG ACTGGGACCT CTACCTTGCA
GCTTACAATA TTGCGATGGT TCCGGACCCA GAATATATTC TCACAAACTG GTACATGACA
AACGGGACTG ACAATAACGC AGGATATTCC AATCCTAAAG TAGACTCCCT AATAACAGAA
GCCAGAAAAA TCACGAACAT GAGTGAACGC TATAAAAAGT TCAATGAGGT AGAAGCTATC
GCTTATGATG AACAGCCCAT GATCATAGTG GCTTACTACG GCTGTGCAAT CGTAAAGAAA
GACTATGTAA AAGGATACGT CTTCGATCCG ACAGCTCATG ACTACCGTAT AAACGCAGAT
ATGCATATCG AGAAGTAA
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| Protein sequence | MKNKNFPLII LLIILLTCAI LTTSGCSSTE ESGAKDAVSG MEVNSGSDDA SQIEGGSENN
TLVLGEMWNI ESIDPINGDG TLVCEKAAIT ETLVGANDDF SLKPGLATSW EQLDENTWEF
KLRNNVTFHD GSKMTAEDVN FTLEKVISEN AKVASMLKID SIEIVDNYTL KIKTKEINPI
LPGVLHYPDT AIISPSSYNE NGEFVKPVGT GPYKLESFDE QTRVLTVVKN DNWWGGEVGL
DKMILKGIPD PNTRAMAIEN GEVDFTVDVP YSETDRIDAI DGINVEKYKT PRVYKLDLNL
KHEPLEDVRV RQAMSYAIDR SDIAENVLYN VGEAAAGPFL PTMVWANKSL KPYSQDLEKA
DELLTAAGWV DTDGDGIRDK DGQPLKFNLM TYSARPGLPP MAEAMAAQLR EAGIGIETEV
LEMGSIDDRR ESGDWDLYLA AYNIAMVPDP EYILTNWYMT NGTDNNAGYS NPKVDSLITE
ARKITNMSER YKKFNEVEAI AYDEQPMIIV AYYGCAIVKK DYVKGYVFDP TAHDYRINAD
MHIEK
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