| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1282 |
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| Symbol | |
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| ID | 3627769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 1588446 |
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| End bp | 1589348 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637700172 |
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| Product | oligopeptide ABC transporter, permease protein |
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| Protein accession | YP_304825 |
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| Protein GI | 73668810 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.284613 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAGTG TATTTGCTAA CAAATTAAGA AAAAAGAGAG TTTCACTTCC GAAAGCTTAC
GGAAGTCAAT TTACAAAAAG AGTTTTTCAA AGAAAAGATA TGCTTTTTGC ACTTTCATCC
CTTTTGCTTT TTGCTGGGCT TGCCATTTTT GCTCCCCTGC TTTCCCCTTA CGACCCCAAT
GCAATTGACC TGAAGAACAA GAATCTGAGT CCTTCAGAAG AGCACATCCT GGGTACCGAT
TACCTCGGAA GGGATATCCT GAGCCGAATC CTTATAGGAG CCCGGACTTC CCTTTCAATT
GCTTCAGGAG TAGTGCTGAT TTCCCTGTTC CTGGGAACTG CTGCGGGATG TGCAGCAGGC
TATTATGGAG GCTTTGTGGA TGAAAGCATC TCCAGAGTTA TAGATATCTT CCTTTCTTTT
CCAGGGATCA TCTTTGCTCT CACTATTATG GGGGCACTCG GGACCGGAGT TTTCAACCTG
ATGCTTGCTC TCTCTATAGC CAACTGGGCA AAGTACGCCA GGATGATGCG GGGGCAGGTC
CTTTCTATCA AAAAACAGGA GTTTGTCCTT TCCGCGATAA CGGGCGGAGC CGGAGATTTT
TATATAATCC GCAAGCATAT TGTACCCAAT GCCATAGCCA CTATCCTCGT GCTGGCCACA
ATAGATTTCG GGCACGTAAT TCTCTCTATT GCTACATTAA GTTTTCTTGG AATAGGGCTG
CCTGCCGATG TGCCTGAATG GGGGGCAATG CTTTCCTCAG GAAAGGAATT CATGAGGACA
GCTCCTTACC AGACGATCTT TCCAGGGCTT GCCATAACCT TCATTGTGAT CATTTTCAGC
ATTCTTGGAG ACGGTATGAG GGATATCCTT GACCCAAACC ACGAAGGAGG CGAAATCGAT
TGA
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| Protein sequence | MDSVFANKLR KKRVSLPKAY GSQFTKRVFQ RKDMLFALSS LLLFAGLAIF APLLSPYDPN
AIDLKNKNLS PSEEHILGTD YLGRDILSRI LIGARTSLSI ASGVVLISLF LGTAAGCAAG
YYGGFVDESI SRVIDIFLSF PGIIFALTIM GALGTGVFNL MLALSIANWA KYARMMRGQV
LSIKKQEFVL SAITGGAGDF YIIRKHIVPN AIATILVLAT IDFGHVILSI ATLSFLGIGL
PADVPEWGAM LSSGKEFMRT APYQTIFPGL AITFIVIIFS ILGDGMRDIL DPNHEGGEID
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