Gene Mbar_A1219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1219 
Symbol 
ID3624266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1506173 
End bp1507543 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content48% 
IMG OID637700109 
Productcobalt ABC transporter, ATP-binding protein 
Protein accessionYP_304766 
Protein GI73668751 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID[TIGR01166] cobalt transport protein ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTC TGGAGACAAC AGACCTTAAA TACACCTATC CGGACGGCAC CCTGGCAATA 
GAGGGGATCA GCATCTCGAT TGATAAGGGA AAAAAGATTG CCTTTGTGGG GCCCAACGGT
TCCGGAAAAT CCACTCTTTT CTTGCTCCTG AACGGTACTC TGGAACCTCA GGAAGGGAAA
ATCATCTTTC ACGGCAAGCC ACTTCTCTAC GACACACCTT CTCTCCGGGA GATACGTAAA
AGCATAGGTA TCGTGTTTCA GAACTCCGAT GACCAGATAT TTGCTCCTAC AGTTTACCAG
GACGTGGCTT TCGGGCCCAC GAACCTTGAG ATGACAGAAG AAGAAGTAGT TGCAAAAGTA
AACGAGACGT TGGAATATGT GGGGCTTCTG GAACTAAAAG ACAAGCCCCC TCACCACTTG
AGCGGGGGAC AAAAAAAGAG GGTTGCAGTC GCAGGGGTTG TGGTGATGGA ACCTGAAGTT
ATCATCCTTG ACGAGCCCCT TGCCAACCTG GACCCCGTAG GGGCGGACGA GATCCTCGAC
CTGTTAAATG AGCTGAACCA GTTCGAAAAG ACAATCGTGA TCTCAACTCA CGATGTGGAC
TTTGCGTATT CCTGGGCTGA CTACATCTAC CTTCTCGTAA ACCGGAAAAT CATCGGGAGC
GGCACCCCTG AGGAGGTATT TTGCGATCCT GGCATGCTCA AAGATGCCGG GCTCAAGATT
CCCATGATAC TTGAGATTTA CTACGAGATC CAGAAAAGAA ATATGGCTTC AGTAAACAGA
GTGCCAAAAA CAGTTCCCGA AATCGTGGAT ACTTTAAAAC CCCCATCCCT TATCTGGGTG
GATGTGCCCG AAGGAGTTAA AGAAGGGGAT AGGCTTGACT TCGGGTTATA TATGGAAGAG
ATCGGGAAGC AGTGTTCCGA GGAAGTTATG GATGCAAGGG TGCTACATAT TCATGAGAAT
GGGCAGGCTA TCGTGGCTGT AAAGAGGAAG GCGGCTGGGA TAGGGAAAGT TCTTGTCTAT
GATACGGACA GCTATAAACT TAAAGAAATC AAAGAACTTC TTGCTTCCGC AGACTTCGAT
GTAACTGGTG CGATGGGTAA AAGGACCAAA CTCATTTTGG AGAGTGATCA CCTGAAACTG
GATTTCACTG TCGGGGTAAT CGATAAATCC ATCCTGATGG CACTTTGCGG GAAGAACGTC
CTGATTTTTA CAGGCGGGGG GATGGTGGAC CACGCTGTCA GGCGGATTTC GGACTACTGT
AAAAAAAGTG GGGTCAGGAT TAAAGTAGGT GTTTTTAACA GGGAAACAGG AAAGGCTCAG
GATTGGAAGG CAGTTCTGGA AGTCAAAGAA CAAAAATCCG AAGCTTCTTG A
 
Protein sequence
MAILETTDLK YTYPDGTLAI EGISISIDKG KKIAFVGPNG SGKSTLFLLL NGTLEPQEGK 
IIFHGKPLLY DTPSLREIRK SIGIVFQNSD DQIFAPTVYQ DVAFGPTNLE MTEEEVVAKV
NETLEYVGLL ELKDKPPHHL SGGQKKRVAV AGVVVMEPEV IILDEPLANL DPVGADEILD
LLNELNQFEK TIVISTHDVD FAYSWADYIY LLVNRKIIGS GTPEEVFCDP GMLKDAGLKI
PMILEIYYEI QKRNMASVNR VPKTVPEIVD TLKPPSLIWV DVPEGVKEGD RLDFGLYMEE
IGKQCSEEVM DARVLHIHEN GQAIVAVKRK AAGIGKVLVY DTDSYKLKEI KELLASADFD
VTGAMGKRTK LILESDHLKL DFTVGVIDKS ILMALCGKNV LIFTGGGMVD HAVRRISDYC
KKSGVRIKVG VFNRETGKAQ DWKAVLEVKE QKSEAS