Gene Mbar_A1172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1172 
Symbol 
ID3624734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1441390 
End bp1442169 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content47% 
IMG OID637700063 
Productiron ABC transporter, ATP-binding protein 
Protein accessionYP_304720 
Protein GI73668705 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAAG TAGATAACCT GAGTTTTGGA TACGACAGAG TGCCCGTATT CAAGGGCATT 
TCATTTGGGG TCGAGAAAGG TTCTTTATGT GGACTCTTCG GGCCAAATGG TTCCGGGAAA
ACAACCCTGT TCAAGTGTTG TATGGGGTTC CTTAAGTACG ACAGCGGTAG TGTATCCATC
GATGGGTGTA ACGTTAAGAA TAAAAAGATC GAGGAGCTGG CAAAACTTGT CGCTTACGTA
CCCCAGGAAC ACAAGCCCCC TTTTCCATAT CTCGTCAAGG AAGTCGTGCT GATGGGTCGG
ACTCCTCATA TGGGTGGTAT CTTTGGCATT TCCGAAGATG ATAAGAGTAA GGTCAAGGAA
GCCATGGAAA TGCTTGAAAT TTCCCATCTC GCCGACAAAC CTTATAATCA GCTCAGCGGC
GGTCAACGCC AGCTTGTGCT CATCGCAAGG GCTCTGGCAC AGGAAACACC GCTGATGCTG
CTGGACGAGC CTACATCCGC TCTGGACTTC TGCAACCAGA TAAGGATATG GAATATTCTG
AAAAAGATTT CCGCGAAGGG GACGACCATA CTGGCCTGCA GCCATGACCC AAACCACATT
TCATGGTTCT GTGACGATGT CATTGTCATG TATCGGGGAG GTCTGGTTGC AAAGGGGAAT
CCAAAAAGCG TAGTATCCGA GCAATTGCTC AGCACTATAT TTAATGGTAT TTGCAGTGTA
GGTTATATGG ACCACCTAAT GATGGTGTAT CCGAAAAATA TCCAGTCGGG TGTCCAGTAG
 
Protein sequence
MLKVDNLSFG YDRVPVFKGI SFGVEKGSLC GLFGPNGSGK TTLFKCCMGF LKYDSGSVSI 
DGCNVKNKKI EELAKLVAYV PQEHKPPFPY LVKEVVLMGR TPHMGGIFGI SEDDKSKVKE
AMEMLEISHL ADKPYNQLSG GQRQLVLIAR ALAQETPLML LDEPTSALDF CNQIRIWNIL
KKISAKGTTI LACSHDPNHI SWFCDDVIVM YRGGLVAKGN PKSVVSEQLL STIFNGICSV
GYMDHLMMVY PKNIQSGVQ