Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1150 |
Symbol | dapA |
ID | 3626283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 1422048 |
End bp | 1422923 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637700041 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_304698 |
Protein GI | 73668683 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGAAG GAGCAATGCC TGCCCTGATA ACTCCTTTTA CAAAGGATGA CAGGATTGAC AGGGAAGGTT TACAAAGGAA TATTGAATTT GTTGAAGAGG GAGGAGTTGC AGGGATTGTG CCATGTGGCA CTACTGGAGA ATCAGCGACT CTTTCTGCAC TTGAGCACGA AGAAGTAATA GATATTGCAG TGGAGTGTTC AAAGGTTCCT GTGATTGCAG GAACGGGTTC AAATAACACA GGAGAAGCTC TCCAGTTTAC AAAACACGCT GCAGATGCGG GTGTTGACGG TGTACTTCTG ATTTCTCCCT ATTATAACAA GCCAAATCCT GCAGGCCTGC TTACGCATTT TAAGAAAATT GCAGAAGCAG TCGATGTTCC TATGGTTATG TATAATATCC CTTCCCGTAC AGGACAGGAT ATGCCACTAG AAGTTATTGT CGAACTTGCA AAAGTTGAAA ATATCGTGGG AATTAAAGAA GCCAGTGGGA ATATCGGTAA GGTTTCCCAG ATTCTGGAAA ATACCATAGA TGAAGACTTC GTGGTTATTT CAGGTGAGGA TAATTTGACT CTTCCGATTC TCTCTGTAGG GGGCCAAGGA GTCATTTCTG TCGCTGCAAA TATAGTGCCT GACAGAATGT CCAGAATGGT AAATGCAGCT CTTGCCGGAG ACTACGAAAC TGCAAGGAAG ATTCATTTTG AAATTGCCCC TCTGATTCGC GCCCTTTTCC TGGAAACGAA CCCTATCCCA GTTAAAAAAG CTGCGGAACT TGCAGGCTTG GCAAGTGGGA ACCTGAGACT TCCACTCGCG CCTCTTAGCG AGACAAATAC TCAGAAGGTT GCAGATGAAC TCAGAAAATT GGGGGTTATA GAATGA
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Protein sequence | MFEGAMPALI TPFTKDDRID REGLQRNIEF VEEGGVAGIV PCGTTGESAT LSALEHEEVI DIAVECSKVP VIAGTGSNNT GEALQFTKHA ADAGVDGVLL ISPYYNKPNP AGLLTHFKKI AEAVDVPMVM YNIPSRTGQD MPLEVIVELA KVENIVGIKE ASGNIGKVSQ ILENTIDEDF VVISGEDNLT LPILSVGGQG VISVAANIVP DRMSRMVNAA LAGDYETARK IHFEIAPLIR ALFLETNPIP VKKAAELAGL ASGNLRLPLA PLSETNTQKV ADELRKLGVI E
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