Gene Mbar_A1117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1117 
Symbol 
ID3627528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1374466 
End bp1375539 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content40% 
IMG OID637700008 
Producthypothetical protein 
Protein accessionYP_304665 
Protein GI73668650 
COG category[S] Function unknown 
COG ID[COG1817] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGAGTTC TTGTCGATAT AGGGCATCCA GCCCATGTTC ATTTTTTTAA AAACACTATA 
TGGAGTCTTG AGAAAAAAGG GCATCAAGTA ATGGTAGTTT CGCGAGACAA GGATGTAGTA
ATAGAGCTCT TGAACGCCTA CGGAATTCCG CATACGGTTT TGAGTAAAGT AAAACCAGGA
AAGATTAATT TGCTTGAAGA ATGGTTCATA AGAGAGTTTA AAACTTTTAA AATTACCCAG
CAATTTGATC CTGACCTTTT TATAGGTATC CTTTCTCCAG CTGTAGCTCA GGTAGCCTGG
ATACAGCGGA AAAAATCCAT AATTTTTAAC GACACCGAAC ACGCATTACT GGCCCAGAAG
TTAACCTATC CCTTCTGTAA CATAATCTGC ACCCCTTCAT GCTATCTAAA AAATGAAGGA
CGAAAACAGA TAAGGTATAG TGGATATCAT GAACTGGCTT ATCTTCATCC ATCTTATTTT
ACTCCCCGTC CTGAGACCCT GAAAGACCTC GGGGTAGAGG AGGGGGAGCC TTTTACAATC
CTTCGCTTTG TTTCATGGGG TGCGCATCAC GATGTCGGCC AGCATGGAAT TAAAGATAAA
GTAGCACTTG TCCAGGAAGC CGAAAAATTC GGAAAAGTAT TCATAACTTC AGAAGGCCCT
CTGGAAAAAG AGTTTGAGAA GTATAGAGTA TGGGTTTCTC CAGAAAAAAT TCACCATTTG
CTCTATTATG CCACTCTATA TGTGGGTGAG GGGGCAACGA TGGCTGTTGA GAGTGCAATC
CTGGGAACTC CATCAATCTA TATTTCCACT CTTGCAGGAA CTATGGGAAA TTTTTCTGAA
CTTGAGAGGA AGTACGGTTT GCTTTTTAAT TACAGTGATT CGCAATCTGC CATAATAAAA
ATCACAGAAC TTTTCAAAGA TTCGGAACTT AAGAAAAGCT GGGGTCTTAA AAGGGCTGCC
CTTCTCAGGG ATAAAATCAA TGTTACCGAG TTCATGGTCA AGCTTATAGA AAATCTTCCT
GAAAAAAAAT CTGGATTTTC TTTATCTTCG GTTTCGGATG AGTCTTATGT ATAA
 
Protein sequence
MRVLVDIGHP AHVHFFKNTI WSLEKKGHQV MVVSRDKDVV IELLNAYGIP HTVLSKVKPG 
KINLLEEWFI REFKTFKITQ QFDPDLFIGI LSPAVAQVAW IQRKKSIIFN DTEHALLAQK
LTYPFCNIIC TPSCYLKNEG RKQIRYSGYH ELAYLHPSYF TPRPETLKDL GVEEGEPFTI
LRFVSWGAHH DVGQHGIKDK VALVQEAEKF GKVFITSEGP LEKEFEKYRV WVSPEKIHHL
LYYATLYVGE GATMAVESAI LGTPSIYIST LAGTMGNFSE LERKYGLLFN YSDSQSAIIK
ITELFKDSEL KKSWGLKRAA LLRDKINVTE FMVKLIENLP EKKSGFSLSS VSDESYV