Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1088 |
Symbol | |
ID | 3627363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 1334426 |
End bp | 1335898 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637699979 |
Product | 7-cyano-7-deazaguanine tRNA-ribosyltransferase |
Protein accession | YP_304636 |
Protein GI | 73668621 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00432] tRNA-guanine transglycosylase, archaeosine-15-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGCAA TATTCGAAAT ACTCGACAAG GATGCAGGCG GAAGGATAGG AAGGCTCAGG ACTCCCCATG GGACTGTTGA GACGCCTACC GTTATGCCTG TGATTAATCC AAATATCCAG CTAATTCCCC CGAAAGAAAT GCGAAACTTC GGGGCAGAGA TTCTGATTAC TAATTCCTAT ATTATTTACC GCAAGGAAGA ACTGAAAAGT GTCGCCCTGG AAAAAGGGTT GCATGGGCTC CTGGGCTTTG ACGGGCCCAT TATGACGGAT TCGGGTTCTT TCCAGCTTTC TGTATATGGA TCCGTCGAAG TTACGAATGA AGAAATTCTC GGGTTCCAGC AAAAGATAGG AAGCGACATT ATTGTCCCGC TGGACATCCC TACGCCCCCT GATGTCCACT ACCGACGGGC TGAAGAGGAA CTTGCAATCA CAGCTGAACG CCTTGAAGCG GCACGCAAGT TTATCCAGAG TGAACAGCTT CTTGCAGGGC CAGTTCAGGG TTCAACCTAT CCTGAACTGA GGGAAAAAGC TGCTTCCCAC CTGAAAGACC TTAATTTTGA AGTTTATCCC CTTGGAGCAG TTGTCCCGCT CATGGAAGCC TACCGTTATG CGGAACTTGT TGATGTTATT GCTGCGTCTA AAAAAGGGCT CTCTCCGGCT TCTCCGGTCC ACCTTTTCGG GGCAGGTCAT CCAATGATGT TTGCCCTTGC AGTAGCCATG GGCTGTGACC TTTTTGATTC GGCAGCCTAC GCCCTTTACG CCAAAGATGG GCGCTATATT ACTGTAAATG GAACCTATCA TGTGGAAAAA CTAAACTATC TGCCCTGTTC CTGTCCGGTC TGTTCAAAGT ACACGGCAGA AGAATTGAAA AAAGCCGATA ATCGGGAAGA ACTTCTGGGA AAACATAACC TTTACGCGAC CTTTGCTGAA ATCCGGTTGA TTAAGCAGTG CATAAAAGAC GGGAAATTGC TTGAACTTGT GGAGCAGCGC TGTCGTGCTC ATCCAAAACT TCTGGATGGG TTGAAGAAGC TTTACACTCA TTCTTCCTGG CTTGAGCAGC TTGATCCGGC TACAAAAGGT ACCTTCTTCT ACTGTGGACC TGAGTCCTCC TCCCGCCCTG AAATCCTGCG TTTTGGAAAA CGGCTGGATA GGTTCAGCCT GCAAGGCTCA GTAATTATTC GGACAGGATC AGTCAAAGGA GAGAAAGATT ACGACCAGAT TCTTACTTTC AAAGCACCTT TTGGAGCGTT TCCTGTCGAA ATGGAAGAAG TGTATCCTTT CAATGCTGAA GTCCCAAAAT TTCCGGATTA CGAATCACTC AATACAGCTC TTTCAAACAC TCTTAAACTG ATAGACCTGA ACCCGGAAGC AGAGTTTACT TTTATTTGCG AGGAGGAGTT CAAGCACCCT CTAATCGAAG AAATCAGAAA AAGGGCAAAA CTGGTATACA GGAAAGATTG GAAAAAAGAA TAA
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Protein sequence | MSAIFEILDK DAGGRIGRLR TPHGTVETPT VMPVINPNIQ LIPPKEMRNF GAEILITNSY IIYRKEELKS VALEKGLHGL LGFDGPIMTD SGSFQLSVYG SVEVTNEEIL GFQQKIGSDI IVPLDIPTPP DVHYRRAEEE LAITAERLEA ARKFIQSEQL LAGPVQGSTY PELREKAASH LKDLNFEVYP LGAVVPLMEA YRYAELVDVI AASKKGLSPA SPVHLFGAGH PMMFALAVAM GCDLFDSAAY ALYAKDGRYI TVNGTYHVEK LNYLPCSCPV CSKYTAEELK KADNREELLG KHNLYATFAE IRLIKQCIKD GKLLELVEQR CRAHPKLLDG LKKLYTHSSW LEQLDPATKG TFFYCGPESS SRPEILRFGK RLDRFSLQGS VIIRTGSVKG EKDYDQILTF KAPFGAFPVE MEEVYPFNAE VPKFPDYESL NTALSNTLKL IDLNPEAEFT FICEEEFKHP LIEEIRKRAK LVYRKDWKKE
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