| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1087 |
|---|
| Symbol | |
|---|
| ID | 3627362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 1333672 |
|---|
| End bp | 1334259 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637699978 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_304635 |
|---|
| Protein GI | 73668620 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1751] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAT CTATTCTCTA TTTTGACGAT GTAGGAGAGT CAAATACAGA CGACGTTATT
ACAGCAGCAG CGAAAAGAGC TTCAGAGCTT CAGATATCTC ATATTGTGGT GGCAAGCACC
AGTGGAAAAA CCGCGCTAAA AATGGCAGAG GCTGTGAAGG GCAGCGGCAT AAAAGTTATT
GGAATAAGCC ACCAGTACGG GCAGAATAAG AAAGGCGAAT GGGAAGTAGA AGAGGAATAC
AAAAAGAAGC TCGAAGAACT TGGAGCGGTA ATAACCACTC AATCACATAT ATTCTCAGGA
GTCGAACGTT CAATCACAAA GAAATTCGGG GGATTTTCCA GAGTAGAAGT AATTTCGGAC
GCTTTCAGAT CTCTCTTCGG AAAAGGATTC AAGGTAGCTA TTGAAGTCGC AGTTATGGCA
GCCGATTCAG GCCATATCCC TGTTTCCGAC AACACAGAGA TTATAGCAAT AGGAGGTACA
AGGCATGGTG CAGACGTAGC ACTTGTGCTC AGGCCAGCCC ACAGCGGAGA TTTCTTCTCC
CTTCAGGTTA GGGAGATTAT TGCCATGCCG CGAGCTAAAG AAGATTAA
|
|---|
| Protein sequence | MEKSILYFDD VGESNTDDVI TAAAKRASEL QISHIVVAST SGKTALKMAE AVKGSGIKVI
GISHQYGQNK KGEWEVEEEY KKKLEELGAV ITTQSHIFSG VERSITKKFG GFSRVEVISD
AFRSLFGKGF KVAIEVAVMA ADSGHIPVSD NTEIIAIGGT RHGADVALVL RPAHSGDFFS
LQVREIIAMP RAKED
|
|---|
| |