Gene Mbar_A1034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1034 
Symbol 
ID3625035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1257191 
End bp1260676 
Gene Length3486 bp 
Protein Length1161 aa 
Translation table11 
GC content42% 
IMG OID637699924 
Producthypothetical protein 
Protein accessionYP_304582 
Protein GI73668567 
COG category 
COG ID 
TIGRFAM ID[TIGR01567] S-layer-related duplication domain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG CTAGTTTACA GATATTTACA GCAATTCTGG TGCTGGGTCT ATTTTGCGGA 
GCTGCAACTG CAGCCCCGAA TATAATAGCA GCATCGCCCG GAGAGAATGC AACTGTCAAT
ACGATAGTCG GCGAGATTCA AGCTTTTAGC ATTCAAACAA ACGAGTCAGC AACTATTGAC
TGGCAGGTTG ATGGAAGCAA TGTTTCCCAA ACATCGTATG ATGATGCAAC GAATACCTCT
GCCCTCAATC ACACGGTTAA GCAAGGTACA TATGATGTCA AAGCGACTGT TCAGTCAACT
GGAGTGAGCA GAACTTGGAG TGTAACCGGA GGATCGAATG TACCGGAAAT CGTATCATTT
TCCCCTTCAT ACTCAACCGT TAACAATAAA GTAGGGCAAT CAAGAAAATT TAATGCAACT
GTTAGCCAGA CTTCAAATAT AACATGGTAT CTTGATGATG TCCAGGTTCA GGAAAACGAG
TCTGTCACTG AGTCATCATA TATCAATACT TCTGCAACAC AGGGCATGCA TACAATTAAA
ATGAACGCAG AAAACGAAAA CGGCAGTGCA GAAAACTCCT GGGCATGGAA TGTATCAACG
CTCGGAGGAT TATCTGTTAA TTCTGACCCC TCCGAAGAAA ATGTTTCAGT TGATAAAGGA
GTATCTAAAA CTTTCAACGT CAATTCCAGC ACGGAAGACC AGGATATTAA TGTTGAGTGG
CTTGTTGACG ATGAATCACA GAAAAAGGAT GAAAGTGTAA CCTCTTCTTC ATACGACTTT
GAAGAAGATG AGAGAGGAAA TTATACCCTC AAGGCAGTGG TAAGTGATCC CAATAGCGTT
TATGATTCAT CGACAAAAAC ATGGACTGTG AGCGTCGGAT CCACAGACAA TTCAACTGGA
AACAGAATCT GGGAAGAAGG AATGCCAGAT ACCTACACAT GGACTGCCCA GAGTTATTCA
GGCTTCTACT ATGACCTTGA TTCCGGAGTA TCCTCAGAAG AGATGACCAT TACAGGTATA
GGTAGAAACA TAAAATCAGG AAACATTGAG TACTCCACAA AACCTACTGA AACTGATTTT
GAATACAATG ATTGGGGTTC GTACCAGATA ATCGGGTTCA TGGCAGAGAA ATACTTCGCA
GGCTATACTG AAAATGGTTC GGAAGTTATA GGAGATGACA TTAGCCCTAT TTCTGATGGG
GTTCTTTCCA AGATTCTCAT AGACACTGAT GATGAAAAAT CAGCAAATGC CGGAGATTCT
CTTGTTCTTG AAGAAGGATA TTCCCTGAAT ATCGTGGAAG TGGATATCAA TGGAGACTCT
GTCCGGGTCC AGCTTGAAAA AGATGGTGAT GTCGTAGACG AGGCATTCCT CAGCTCGGGC
GATGACTATG TCTATGAAAC TGATCTTGGA AACGCAGAAG ATGTGCCCAT AATCATTGCT
CATATTGGCT CGGTTTTCCA AGGACATGAG TCCTCTGCTG TCTTCATACA GGGTCTCTTC
CAGATTTCGG ATGATTATGT AGAAGTTGAA AACGGAGATA CCTTGGGGGA AATGGAAGTA
AATTCCGTTA GCAGCAGTGA AATAAAGATG GAGAATGATG ATAATGTCGG ACTCGATAAG
GGAGATACGA TAGACCTTAT GGGTAAAATA CAGATTCAGG TAGCTGATGA TGACACACTG
CGCTTTGCCC CGACACTTGA CACCTCGGAA GAGGGTACAT ATGAGCTGCG CGGGACTGTC
TATGACAAAG ACATGGATGG TGATTCACTC CCTAGCTGGA CGCCCTTTAA CTTTGAAGGT
TTCTATTACA ACATAGATGA AGGAATTGGG ACTGAAAATC TTACAATAGG AGAGCTTGAC
GGCAGAAATA TACCTTCAGG CGAACTTGTC TACAAATCAA CACCACAAGC TGTTGATTTT
GATCACGATG AATGGGGCAA CTTTACAGTT ATTGGTTTCA TGGCAGACAA GTACTTTGCC
GGGTATACTG ATGATTCCGT TGGAGGAGCT GTTGATGATG TGAGCCTTCT TTCGGATAAT
ATTCTCTCTA AAGTCCTTAC AGACAGCGAT GACAAAAGGT CTATGGATTC AGGTTCTGCC
CTTACCCTTG AAGAGGGTTA TTCTTTGAAG ATCAAAGAAG TCAATATCAA TGGAGACTCT
GTCTGGGTTC AGCTAGAAAA AGATGGTGAT GTTGTAGACG AGGCATTCCT CAGCTCGGAC
GATGACTATG TCTATGAAAC TGATCTTGGA GACGCAGAAG ACGTACCGCT GATTATAGTC
CATTTCGGCA CGGTTTTCCA AGGAGCTGAG TCCTCTGCTG TCTTCATACA GGGCCTCTTC
CAGCTCTCAG ACCAGTACAC CGAAATTGAT AATGGAGATA CTTTTGGCGA GATGGAGATC
ACCAGTGTCT CTGAAAGTGG CATTACAATG AAAAACGATG ATAGCATCGG GCTTGACAAG
GATGATACCA CCGAGATCAT GGGCAATGTC AGTTTCAAGA CTGCTGATGA CAGTACTCTC
AGGTTCTACC CCTTCGTGGA AGTTGAAACC GGCGGTAGTG GAAACGACGA CAATTCACTG
AAAATAAGTG TGCCTGATAA GATCTATGCC GGAAATCCGT TTAATATCGA AGTGACTGCA
GGTGGAGAAA CAATCGAAGG CGCTAATGTT TCGGTTAACG AAAGTAATGT AGGTGAAACC
GATGATGATG GAGTTATTGA ATATACAGCC GAAGATGTCG GAACTTTGAA GATAACTGCA
GAAAAGGATG ACTACGAAAC TGCAAATAAA AACATTAACG TCAGTGCTCC GAAAGTAGAA
ATGACAGTTA ACGTTTCACC TGAGACAGTT TATGTAGGCG ATACCCTGAA CATTGAGGTT
GTCAAGTCAA TAGGCGGCGA TCCAATTGAG GATGCAAACG TATTGATTGA CGGAAACATC
ATTGGTAAAA CAGATTCCAG CGGAAAAGCT ACCTACAAGA CAGATAAAAG CGGTAATCTT
GAATTGGGCT TAACAAAAGA AGGATTTGAA GACCAGGAAG TAAATGTAAA AGTAAAAGAT
TTGGAAGCTA TCTTCAAATA CTCAAACCTG GTAATCGATC CTTTGGAAAT AAGTGCAGGA
AAGGACGCTA CAATCTCAGT TAACGTCGAA AATACAGGTA ACGCTGCAGG AAATGAAAGT
GTAGAGTTGC TTATTAACGG AAACATAAGT GACTCAAAAG ACGTTTCCCT AGGCGTTGGG
AACAATACCA CTGTAACCTT TGAGCACGCA GAAGAGGAAC CAGGAACCTA CAAGGTAGAA
ATTGGAGAAG AAACCGCAAA CTACACTGTA AAGGAAAAAT CTTCCTTAAT GCTCTACATT
CTTGGATTAA TTGTCCTGTT AATAATCGGT GGAGCTGCTT ATTACTTTAC AAAAGGCGGC
GGAGATGTGA CAAAGTTATC TGAACAGGCA AAGGAATTTA TTAACTCGGT GAAACCAAAG
AAATAA
 
Protein sequence
MKKASLQIFT AILVLGLFCG AATAAPNIIA ASPGENATVN TIVGEIQAFS IQTNESATID 
WQVDGSNVSQ TSYDDATNTS ALNHTVKQGT YDVKATVQST GVSRTWSVTG GSNVPEIVSF
SPSYSTVNNK VGQSRKFNAT VSQTSNITWY LDDVQVQENE SVTESSYINT SATQGMHTIK
MNAENENGSA ENSWAWNVST LGGLSVNSDP SEENVSVDKG VSKTFNVNSS TEDQDINVEW
LVDDESQKKD ESVTSSSYDF EEDERGNYTL KAVVSDPNSV YDSSTKTWTV SVGSTDNSTG
NRIWEEGMPD TYTWTAQSYS GFYYDLDSGV SSEEMTITGI GRNIKSGNIE YSTKPTETDF
EYNDWGSYQI IGFMAEKYFA GYTENGSEVI GDDISPISDG VLSKILIDTD DEKSANAGDS
LVLEEGYSLN IVEVDINGDS VRVQLEKDGD VVDEAFLSSG DDYVYETDLG NAEDVPIIIA
HIGSVFQGHE SSAVFIQGLF QISDDYVEVE NGDTLGEMEV NSVSSSEIKM ENDDNVGLDK
GDTIDLMGKI QIQVADDDTL RFAPTLDTSE EGTYELRGTV YDKDMDGDSL PSWTPFNFEG
FYYNIDEGIG TENLTIGELD GRNIPSGELV YKSTPQAVDF DHDEWGNFTV IGFMADKYFA
GYTDDSVGGA VDDVSLLSDN ILSKVLTDSD DKRSMDSGSA LTLEEGYSLK IKEVNINGDS
VWVQLEKDGD VVDEAFLSSD DDYVYETDLG DAEDVPLIIV HFGTVFQGAE SSAVFIQGLF
QLSDQYTEID NGDTFGEMEI TSVSESGITM KNDDSIGLDK DDTTEIMGNV SFKTADDSTL
RFYPFVEVET GGSGNDDNSL KISVPDKIYA GNPFNIEVTA GGETIEGANV SVNESNVGET
DDDGVIEYTA EDVGTLKITA EKDDYETANK NINVSAPKVE MTVNVSPETV YVGDTLNIEV
VKSIGGDPIE DANVLIDGNI IGKTDSSGKA TYKTDKSGNL ELGLTKEGFE DQEVNVKVKD
LEAIFKYSNL VIDPLEISAG KDATISVNVE NTGNAAGNES VELLINGNIS DSKDVSLGVG
NNTTVTFEHA EEEPGTYKVE IGEETANYTV KEKSSLMLYI LGLIVLLIIG GAAYYFTKGG
GDVTKLSEQA KEFINSVKPK K