Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1034 |
Symbol | |
ID | 3625035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 1257191 |
End bp | 1260676 |
Gene Length | 3486 bp |
Protein Length | 1161 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637699924 |
Product | hypothetical protein |
Protein accession | YP_304582 |
Protein GI | 73668567 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01567] S-layer-related duplication domain |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAG CTAGTTTACA GATATTTACA GCAATTCTGG TGCTGGGTCT ATTTTGCGGA GCTGCAACTG CAGCCCCGAA TATAATAGCA GCATCGCCCG GAGAGAATGC AACTGTCAAT ACGATAGTCG GCGAGATTCA AGCTTTTAGC ATTCAAACAA ACGAGTCAGC AACTATTGAC TGGCAGGTTG ATGGAAGCAA TGTTTCCCAA ACATCGTATG ATGATGCAAC GAATACCTCT GCCCTCAATC ACACGGTTAA GCAAGGTACA TATGATGTCA AAGCGACTGT TCAGTCAACT GGAGTGAGCA GAACTTGGAG TGTAACCGGA GGATCGAATG TACCGGAAAT CGTATCATTT TCCCCTTCAT ACTCAACCGT TAACAATAAA GTAGGGCAAT CAAGAAAATT TAATGCAACT GTTAGCCAGA CTTCAAATAT AACATGGTAT CTTGATGATG TCCAGGTTCA GGAAAACGAG TCTGTCACTG AGTCATCATA TATCAATACT TCTGCAACAC AGGGCATGCA TACAATTAAA ATGAACGCAG AAAACGAAAA CGGCAGTGCA GAAAACTCCT GGGCATGGAA TGTATCAACG CTCGGAGGAT TATCTGTTAA TTCTGACCCC TCCGAAGAAA ATGTTTCAGT TGATAAAGGA GTATCTAAAA CTTTCAACGT CAATTCCAGC ACGGAAGACC AGGATATTAA TGTTGAGTGG CTTGTTGACG ATGAATCACA GAAAAAGGAT GAAAGTGTAA CCTCTTCTTC ATACGACTTT GAAGAAGATG AGAGAGGAAA TTATACCCTC AAGGCAGTGG TAAGTGATCC CAATAGCGTT TATGATTCAT CGACAAAAAC ATGGACTGTG AGCGTCGGAT CCACAGACAA TTCAACTGGA AACAGAATCT GGGAAGAAGG AATGCCAGAT ACCTACACAT GGACTGCCCA GAGTTATTCA GGCTTCTACT ATGACCTTGA TTCCGGAGTA TCCTCAGAAG AGATGACCAT TACAGGTATA GGTAGAAACA TAAAATCAGG AAACATTGAG TACTCCACAA AACCTACTGA AACTGATTTT GAATACAATG ATTGGGGTTC GTACCAGATA ATCGGGTTCA TGGCAGAGAA ATACTTCGCA GGCTATACTG AAAATGGTTC GGAAGTTATA GGAGATGACA TTAGCCCTAT TTCTGATGGG GTTCTTTCCA AGATTCTCAT AGACACTGAT GATGAAAAAT CAGCAAATGC CGGAGATTCT CTTGTTCTTG AAGAAGGATA TTCCCTGAAT ATCGTGGAAG TGGATATCAA TGGAGACTCT GTCCGGGTCC AGCTTGAAAA AGATGGTGAT GTCGTAGACG AGGCATTCCT CAGCTCGGGC GATGACTATG TCTATGAAAC TGATCTTGGA AACGCAGAAG ATGTGCCCAT AATCATTGCT CATATTGGCT CGGTTTTCCA AGGACATGAG TCCTCTGCTG TCTTCATACA GGGTCTCTTC CAGATTTCGG ATGATTATGT AGAAGTTGAA AACGGAGATA CCTTGGGGGA AATGGAAGTA AATTCCGTTA GCAGCAGTGA AATAAAGATG GAGAATGATG ATAATGTCGG ACTCGATAAG GGAGATACGA TAGACCTTAT GGGTAAAATA CAGATTCAGG TAGCTGATGA TGACACACTG CGCTTTGCCC CGACACTTGA CACCTCGGAA GAGGGTACAT ATGAGCTGCG CGGGACTGTC TATGACAAAG ACATGGATGG TGATTCACTC CCTAGCTGGA CGCCCTTTAA CTTTGAAGGT TTCTATTACA ACATAGATGA AGGAATTGGG ACTGAAAATC TTACAATAGG AGAGCTTGAC GGCAGAAATA TACCTTCAGG CGAACTTGTC TACAAATCAA CACCACAAGC TGTTGATTTT GATCACGATG AATGGGGCAA CTTTACAGTT ATTGGTTTCA TGGCAGACAA GTACTTTGCC GGGTATACTG ATGATTCCGT TGGAGGAGCT GTTGATGATG TGAGCCTTCT TTCGGATAAT ATTCTCTCTA AAGTCCTTAC AGACAGCGAT GACAAAAGGT CTATGGATTC AGGTTCTGCC CTTACCCTTG AAGAGGGTTA TTCTTTGAAG ATCAAAGAAG TCAATATCAA TGGAGACTCT GTCTGGGTTC AGCTAGAAAA AGATGGTGAT GTTGTAGACG AGGCATTCCT CAGCTCGGAC GATGACTATG TCTATGAAAC TGATCTTGGA GACGCAGAAG ACGTACCGCT GATTATAGTC CATTTCGGCA CGGTTTTCCA AGGAGCTGAG TCCTCTGCTG TCTTCATACA GGGCCTCTTC CAGCTCTCAG ACCAGTACAC CGAAATTGAT AATGGAGATA CTTTTGGCGA GATGGAGATC ACCAGTGTCT CTGAAAGTGG CATTACAATG AAAAACGATG ATAGCATCGG GCTTGACAAG GATGATACCA CCGAGATCAT GGGCAATGTC AGTTTCAAGA CTGCTGATGA CAGTACTCTC AGGTTCTACC CCTTCGTGGA AGTTGAAACC GGCGGTAGTG GAAACGACGA CAATTCACTG AAAATAAGTG TGCCTGATAA GATCTATGCC GGAAATCCGT TTAATATCGA AGTGACTGCA GGTGGAGAAA CAATCGAAGG CGCTAATGTT TCGGTTAACG AAAGTAATGT AGGTGAAACC GATGATGATG GAGTTATTGA ATATACAGCC GAAGATGTCG GAACTTTGAA GATAACTGCA GAAAAGGATG ACTACGAAAC TGCAAATAAA AACATTAACG TCAGTGCTCC GAAAGTAGAA ATGACAGTTA ACGTTTCACC TGAGACAGTT TATGTAGGCG ATACCCTGAA CATTGAGGTT GTCAAGTCAA TAGGCGGCGA TCCAATTGAG GATGCAAACG TATTGATTGA CGGAAACATC ATTGGTAAAA CAGATTCCAG CGGAAAAGCT ACCTACAAGA CAGATAAAAG CGGTAATCTT GAATTGGGCT TAACAAAAGA AGGATTTGAA GACCAGGAAG TAAATGTAAA AGTAAAAGAT TTGGAAGCTA TCTTCAAATA CTCAAACCTG GTAATCGATC CTTTGGAAAT AAGTGCAGGA AAGGACGCTA CAATCTCAGT TAACGTCGAA AATACAGGTA ACGCTGCAGG AAATGAAAGT GTAGAGTTGC TTATTAACGG AAACATAAGT GACTCAAAAG ACGTTTCCCT AGGCGTTGGG AACAATACCA CTGTAACCTT TGAGCACGCA GAAGAGGAAC CAGGAACCTA CAAGGTAGAA ATTGGAGAAG AAACCGCAAA CTACACTGTA AAGGAAAAAT CTTCCTTAAT GCTCTACATT CTTGGATTAA TTGTCCTGTT AATAATCGGT GGAGCTGCTT ATTACTTTAC AAAAGGCGGC GGAGATGTGA CAAAGTTATC TGAACAGGCA AAGGAATTTA TTAACTCGGT GAAACCAAAG AAATAA
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Protein sequence | MKKASLQIFT AILVLGLFCG AATAAPNIIA ASPGENATVN TIVGEIQAFS IQTNESATID WQVDGSNVSQ TSYDDATNTS ALNHTVKQGT YDVKATVQST GVSRTWSVTG GSNVPEIVSF SPSYSTVNNK VGQSRKFNAT VSQTSNITWY LDDVQVQENE SVTESSYINT SATQGMHTIK MNAENENGSA ENSWAWNVST LGGLSVNSDP SEENVSVDKG VSKTFNVNSS TEDQDINVEW LVDDESQKKD ESVTSSSYDF EEDERGNYTL KAVVSDPNSV YDSSTKTWTV SVGSTDNSTG NRIWEEGMPD TYTWTAQSYS GFYYDLDSGV SSEEMTITGI GRNIKSGNIE YSTKPTETDF EYNDWGSYQI IGFMAEKYFA GYTENGSEVI GDDISPISDG VLSKILIDTD DEKSANAGDS LVLEEGYSLN IVEVDINGDS VRVQLEKDGD VVDEAFLSSG DDYVYETDLG NAEDVPIIIA HIGSVFQGHE SSAVFIQGLF QISDDYVEVE NGDTLGEMEV NSVSSSEIKM ENDDNVGLDK GDTIDLMGKI QIQVADDDTL RFAPTLDTSE EGTYELRGTV YDKDMDGDSL PSWTPFNFEG FYYNIDEGIG TENLTIGELD GRNIPSGELV YKSTPQAVDF DHDEWGNFTV IGFMADKYFA GYTDDSVGGA VDDVSLLSDN ILSKVLTDSD DKRSMDSGSA LTLEEGYSLK IKEVNINGDS VWVQLEKDGD VVDEAFLSSD DDYVYETDLG DAEDVPLIIV HFGTVFQGAE SSAVFIQGLF QLSDQYTEID NGDTFGEMEI TSVSESGITM KNDDSIGLDK DDTTEIMGNV SFKTADDSTL RFYPFVEVET GGSGNDDNSL KISVPDKIYA GNPFNIEVTA GGETIEGANV SVNESNVGET DDDGVIEYTA EDVGTLKITA EKDDYETANK NINVSAPKVE MTVNVSPETV YVGDTLNIEV VKSIGGDPIE DANVLIDGNI IGKTDSSGKA TYKTDKSGNL ELGLTKEGFE DQEVNVKVKD LEAIFKYSNL VIDPLEISAG KDATISVNVE NTGNAAGNES VELLINGNIS DSKDVSLGVG NNTTVTFEHA EEEPGTYKVE IGEETANYTV KEKSSLMLYI LGLIVLLIIG GAAYYFTKGG GDVTKLSEQA KEFINSVKPK K
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