Gene Mbar_A1016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1016 
Symbol 
ID3625595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1241848 
End bp1243890 
Gene Length2043 bp 
Protein Length680 aa 
Translation table11 
GC content45% 
IMG OID637699905 
Producttype I restriction-modification system methyltransferase subunit 
Protein accessionYP_304564 
Protein GI73668549 
COG category[V] Defense mechanisms 
COG ID[COG0286] Type I restriction-modification system methyltransferase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATAATT TTCAGGAAAA AACGAGTTTT ATCTGGTCAG TTGCAGATGA AGTCTTAAGG 
GACGACTTCA AGAGAGGAGA ATACCCTGAT GTGATCCTTC CATTCACGGT ATTGAGGCGG
CTTGACTGCG TACTTGCGCC TACAAAAGAT AAAGTCCTTG AGTATGACAA AAAACTGGAA
GGAAAAATTG AGAACAAAAA TGGTGCACTA CGTCATGCTT CAGGTTACAG TTTTTACAAT
ACATCACCTT ATGATTTTGA AAAACTTCTT GCAGCCCCAA CCAGCATTGG CCAGAACCTC
CGCGCCTATA TAAATGGTTT TTCGGAAAAC ATGCGAGAGG TTATAGACAA GTTCAAACTC
TGGGGAACCA TCGACACGCT GGAAGAAAAA GGCCTGCTCT TCCTTTTGAT CCAGAAGTTT
GCAAACGTTG ACCTGCATCC CGACGCTGTC AGCAACCATG AAATGGGCTA CATATTTGAA
GAACTGATCC GCAAGTTCAA TGAGCAGACG AATGAAAACC CAGGCGAACA CTTTACTCCG
AGAGAGGTAA TTCGGCTGAT GGTGAACTTA CTGTTAAGCC AGGACCAGGA AAAGCTTGCT
CAGAACCACA TTGTTAGAAC GGTTTACGAT CCTGCCTGCG GTACAGGCGG AATGCTGACA
ATTGCAAAAG AGCATATCCT TGACCACATT AACCCCAATG CAAATATCAA ACTCTTTGGC
CAGGAAGTAA ACGACAAAAC CTTTGCAATC TCCAAATCAG ATATGCTGAT TAAAGGCGAC
GACAAAGATG CCGACAACAT CAAGCCTGAC TCTTCCTTTT CAAAAGACGG CCATGCAGGA
GAAACCTTTG ATTATATCCT CTCAAATCCC CCCTACGGCA AAGACTGGAA AAAAGAGGAG
GATTTCATTG AAAAAGAGGC AAAGAAAGGC TATGAAGGCC GTTTCGGAGC CGGACTTCCA
AGAAAAAGCG ACGGCCAGCT TATTTTTGTC CAGCACATGA TCTCCAAGAT GAAGCCCACG
GAAGAAGGCG GCTCAAGAAT CGCCATCGTC ATGAACGGAT CACCCCTCTT TACAGGCGAT
GCAGGCTCAG GAGAAAGTGA GATCCGCCGC TGGATTATTG AAAACGACTG GCTCGAAGCG
ATTGTGGCCC TTCCAAATCA ACTTTTCTAC AACACAGGCA TTAACACCTA TATCTGGATT
ATCACAAACC GCAAGGATGA ACAGCGCAGA GGAAAAGTTC AGCTTATAAA CGCTGCCGAT
TTCTACGTAA AAATGCGAAA GAGCCTCGGC GACAAGCGCA ATGAGATCTC CCCTTCCCAG
ATCGAAGAGA TCACAAAGCT TCATACCGAT TTCAAAGAGA ACGAGTTTGT GAAGATTTTC
GATGACGAAG CCTTCGGCTA CAGGAAAATT ACAGTTGAAC GCCCCTTGCG CCTGAATTTC
CAGGCCTCTC CGGAACGGAT AACACGCCTG AAAGAGCAGT CAGCTTTCCA GAAACTTGCT
GTCAGCAAAA AGAAAAAAGA CCTCCAGGAA AAAGCCAGGG AGGAAGCTGA AGGCCGAAAA
GTCCGGGAGG AGATCATAAA TGCCCTTTCC GGCATGGATG CAAATGTTTT CTACACAGAC
CGGGAACAGT TTGAAAAAGA CCTGAACGCA GCCCTGAAAA AAGCAGACCT GAAACCTGCC
ACAGCAGTAA AAAAATCTAT CTTTGAAGCC CTTTCCGAAA GCGACGAAAA CGCCGAGACC
TGTAAAGATA AAAAAGGTAA TAACGAAGCC GATTCCCAGC TTAAGGACAC TGAAAATGTT
CCCCTGAAAG AGGATATTTA CACTTACTTT GAAAGAGAAG TCAAGCCTCA TGTTCCGGAT
GCCTGGATTG ATGAAACAAC CCGCGACCCA AAAGACGGAA AGGTCGGAAA AGTCGGGTAC
GAGATTAACT TCAACCGCTA TTTCTACAAA TACGAGCCTC CGAGAGCACT TGAAGATATC
GAGGCTGATA TCAATAAACT GGAGAATGAA ATTCTGGAAT TGTTGAGGGA GATGGCTGAA
TGA
 
Protein sequence
MNNFQEKTSF IWSVADEVLR DDFKRGEYPD VILPFTVLRR LDCVLAPTKD KVLEYDKKLE 
GKIENKNGAL RHASGYSFYN TSPYDFEKLL AAPTSIGQNL RAYINGFSEN MREVIDKFKL
WGTIDTLEEK GLLFLLIQKF ANVDLHPDAV SNHEMGYIFE ELIRKFNEQT NENPGEHFTP
REVIRLMVNL LLSQDQEKLA QNHIVRTVYD PACGTGGMLT IAKEHILDHI NPNANIKLFG
QEVNDKTFAI SKSDMLIKGD DKDADNIKPD SSFSKDGHAG ETFDYILSNP PYGKDWKKEE
DFIEKEAKKG YEGRFGAGLP RKSDGQLIFV QHMISKMKPT EEGGSRIAIV MNGSPLFTGD
AGSGESEIRR WIIENDWLEA IVALPNQLFY NTGINTYIWI ITNRKDEQRR GKVQLINAAD
FYVKMRKSLG DKRNEISPSQ IEEITKLHTD FKENEFVKIF DDEAFGYRKI TVERPLRLNF
QASPERITRL KEQSAFQKLA VSKKKKDLQE KAREEAEGRK VREEIINALS GMDANVFYTD
REQFEKDLNA ALKKADLKPA TAVKKSIFEA LSESDENAET CKDKKGNNEA DSQLKDTENV
PLKEDIYTYF EREVKPHVPD AWIDETTRDP KDGKVGKVGY EINFNRYFYK YEPPRALEDI
EADINKLENE ILELLREMAE