| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1002 |
|---|
| Symbol | |
|---|
| ID | 3626885 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 1223230 |
|---|
| End bp | 1223778 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637699891 |
|---|
| Product | pyruvate ferredoxin oxidoreductase subunit gamma |
|---|
| Protein accession | YP_304550 |
|---|
| Protein GI | 73668535 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
|---|
| TIGRFAM ID | [TIGR02175] 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGAAA TCAGAATACA CGGTCGAGGA GGCCAGGGTT CTGTTACCGC GGCTGAAATG
CTTTCCGTTG CAGCTTTTGA AGATGGAAAG TTCAGCCAGG CCTTCCCCGC TTTTGGGGTA
GAGCGTAGAG GTGCCCCAGT CCAGGCATTC ACGAGGATTA ACAACAATCC TATCAGGCTC
CGAAGTCAGG TTTACACCCC GGATTATGTT ATTGTCCAGG ACGCAACCCT GCTTGAAACT
GTTGACGTTG CAAGTGGAGT AAAGGATGAT GGAATAATTA TTGTTAACAC AACCGAAAAC
CCGGAAAGCC TGAAACTCAA TACAAAAGCT AGGGTCATGA CCGTGGACGC TACCAAGGTG
GCAATGGACA TAATAGGTGT TCCCATTGTA AATACTGTTC TCCTTGGAGC TTTTGCGGGT
GCAACCGGAG AAATCAATGT TGAATCAATT CAGCATGCAA TAAGGGCTCG TTTTTCAGGC
AAAGTCGGAG AAAAGAATGC AAATGCAATT CAGAAGGCCT ACAAGCTTAT CAGGGGGGAA
GAAGCGTGA
|
|---|
| Protein sequence | MKEIRIHGRG GQGSVTAAEM LSVAAFEDGK FSQAFPAFGV ERRGAPVQAF TRINNNPIRL
RSQVYTPDYV IVQDATLLET VDVASGVKDD GIIIVNTTEN PESLKLNTKA RVMTVDATKV
AMDIIGVPIV NTVLLGAFAG ATGEINVESI QHAIRARFSG KVGEKNANAI QKAYKLIRGE
EA
|
|---|
| |