Gene Mbar_A1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1000 
Symbol 
ID3626883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1221738 
End bp1222946 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content45% 
IMG OID637699889 
Productpyruvate ferredoxin oxidoreductase, alpha subunit 
Protein accessionYP_304548 
Protein GI73668533 
COG category[C] Energy production and conversion 
COG ID[COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGACC CGGCTTACAG AAAGAAAATG GTAGTCGTGG AAGGTTCCTA CGCTGTAGCC 
CATTCCGCAA AAGTCTGCCG TCCAAATGTA ATTTCAGCCT ATCCTATTAC TCCTCAGACA
CATATTGTCG AACATTTATC CCAGTTTATG GCAGACGGAG AAATCCCTAA CTGTGAGTAT
GTTAATGTGG AAGCTGAGTT CTCGGCAATT TCTGCCTTAA TAGGAGCATC AGCTGTAGGT
GCAAGAACCT ATTCAGCCAC AACTTCTCAG GGACTTCTGC TCATGCATGA GGCACTTTTT
AACACTTCAG GTATGAGGCT TCCTGTTGTA ATGACAGTGG CAAATAGAGC AGTTAGCGCT
CCAATTAACA TATGGAACGA TCATCAAGAT GCTATTGCGC AGAGAGATAC AGGCTGGATG
CAGCTTTATG TAGAGGATGT TCAGGAAGCA TGCGATACCC TGCCCCAGCT CTACAAGATC
GCAGAAGACA ATGAGATCAT GGTTCCGGGT ATGGTCTGCA TGGACGGCTT TATCCTGTCT
CACGTTTATG AGCCTGTTGT CCTGCTTGAA CAGGACTTGA CCGACAATTT CCTCCCGCCT
TTCCAGCCCG AAGATATTCT TGATCCTGAA GACCCCAAGA CTTTCGGAGC CTTTGCATCT
CCGGATACAT ATGAAGAGTT CAGATATCTC CACGAGCAGG CAATGCAGAA AGCCCTTCCT
AAAATAGAAG CCACAGCAAA GGAATTTGAG GAAGTATATG GTAGATACCA CGGAGGACTT
ATTGACGGTT ATATGCTTGA TGATGCCGAA ATAGTTGTCA TGGCTATGGG CTCTATTCTC
GGCACTGTCA AGGATGTTGT TGATAAGTAT AGAGCAAAAG GAGAAAAGAT CGGCGTTTTA
AAGGTCAGGT CCTTCAGGCC TTTCCCGAAG GAGCAGATCT GCAAGGCTGT TAAGAATGCA
CACGCAGTTG TTGTACTTGA TAAGAATATT TCTATAGGGA CAAATGAAGG AGCGCTCTTT
ACAGAAACAA AATCCTGCCT CTACAACAGT AAAGTCCGTG TGCCTGTGAT TGGTTATACT
ATAGGGCACG GAGGCCGTGA CATTCCTGTG GAAAGTATTG CAAAGGTTAT AGAAGAAACC
AAGAAAGTTG CAAAGTCCGG AATCACGATT GAAAGCCAAT TCATGGACCT TAAGGAGGAG
TTGCTATGA
 
Protein sequence
MIDPAYRKKM VVVEGSYAVA HSAKVCRPNV ISAYPITPQT HIVEHLSQFM ADGEIPNCEY 
VNVEAEFSAI SALIGASAVG ARTYSATTSQ GLLLMHEALF NTSGMRLPVV MTVANRAVSA
PINIWNDHQD AIAQRDTGWM QLYVEDVQEA CDTLPQLYKI AEDNEIMVPG MVCMDGFILS
HVYEPVVLLE QDLTDNFLPP FQPEDILDPE DPKTFGAFAS PDTYEEFRYL HEQAMQKALP
KIEATAKEFE EVYGRYHGGL IDGYMLDDAE IVVMAMGSIL GTVKDVVDKY RAKGEKIGVL
KVRSFRPFPK EQICKAVKNA HAVVVLDKNI SIGTNEGALF TETKSCLYNS KVRVPVIGYT
IGHGGRDIPV ESIAKVIEET KKVAKSGITI ESQFMDLKEE LL