Gene Mbar_A0993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0993 
Symbol 
ID3626876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1213217 
End bp1214188 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content43% 
IMG OID637699883 
Productzinc ABC transporter, zinc-binding protein 
Protein accessionYP_304542 
Protein GI73668527 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.27598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTGA AAATTCTACC TTTATTGGTG CTCTTGACTG TTGGTCTGAG CCTTTTTGCC 
AGCGGCTGTA CAGGTCCAGG TGACTCCCAA AATAATGAGA GTACAGGACA GGAAGCTGAA
GTAGCAGAAT CTAATCAGCC TATAACCGTA GCTGTAAGTG TGCTTCCTCA GGCTGAGTTT
GTAGAGAAAG TGGGGGGGGA CAAAGTAAAA ACTGTTGTTA TAATTCCTCC GGGAGCAGAC
CCTCATACAT ATGAGCCGTC TCCTAAAGAA ATAGAAAATG TGAGCAAAGC TAGTATGTAT
GTTACAGTCG GCATCGATAT GCCATTTGAG GACGTCTGGA TTAATAGGTT TGAATCTATT
AACAGTGGAA CTCTTATTGT AAACTCTTCT AATGGAATCA AACTCAGGGG ACTTGCTGCT
CACGATCATC ACGAAGAGGG AACAGAGGAA CACGCAGGAG AATCTGAAGC TGATAACGAA
GAAACTGAAT TGGATCCCCA CATATGGACA TCTCCTTCAA ATGCAAAAAT AATGGTCGAA
GATATTTATG AGGGACTTGC CAAAATAGAT CCTGAGAACG AAACTTATTA TGCCCAGAAT
AGAGATGCTT ATCTGAAGGA GCTGGATGCT CTGGATGCAA GGATTCGCGA AAAGCTTGAA
GGGAAAACGG AAAGAAACTT CATGGTTTAT CACCCTGCCT GGGGATACTT TGCATTGGAT
TACAACCTTA CCATGATTCC AGTTGAGAGT GAAGGAAAAG AGCCAAGTGC TGAGGATCTG
GCGAAGCTTG TAGATCTTGC AAAGGAAAAG CATGTCAAAG TAATCTTTAT CCAGCCCCAA
ACAAGTACAC AGAGTGCGCA AGCTGTAGCT GAAGAGATAG GCGGTGAGGT TGTAGCTGTA
GACCCGCTTG AAAAGGATTA CATCGCAAAT ATGGATAACG TATCTGATAT TTTTGCCAGA
AATCTTGTAT GA
 
Protein sequence
MNLKILPLLV LLTVGLSLFA SGCTGPGDSQ NNESTGQEAE VAESNQPITV AVSVLPQAEF 
VEKVGGDKVK TVVIIPPGAD PHTYEPSPKE IENVSKASMY VTVGIDMPFE DVWINRFESI
NSGTLIVNSS NGIKLRGLAA HDHHEEGTEE HAGESEADNE ETELDPHIWT SPSNAKIMVE
DIYEGLAKID PENETYYAQN RDAYLKELDA LDARIREKLE GKTERNFMVY HPAWGYFALD
YNLTMIPVES EGKEPSAEDL AKLVDLAKEK HVKVIFIQPQ TSTQSAQAVA EEIGGEVVAV
DPLEKDYIAN MDNVSDIFAR NLV