Gene Mbar_A0990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0990 
Symbol 
ID3626873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1210437 
End bp1210958 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content43% 
IMG OID637699881 
ProductCheW protein 
Protein accessionYP_304540 
Protein GI73668525 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.519788 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAAG AAACATTAGA TGAAGGTTCA GAATTTTCGG AAGAAAGTCT TCGTTTAGTG 
ACCTTTGAGC TTTCAGGTGA AGAGTTCGGA GTAGATATTA TGCAGGTCTC CGAAGTTATT
CCGGTTCCGA GGATCACCCG AATTCCTCAG GCTCCGGAAT GCGTAAAAGG ACTCATTAAC
CTGCGGGGAA AGATCCTCGT AGTGATAGAC CTTAACAAGC GGCTTGATTT CAGATCAAAA
GAGACTGACA GCCTGTCCAG AATTATCATA GTGGAGGTTA AAGATACAGT CCTTGGAATG
CTTGTAAATT CCGTAAAGGA GGTCATGAGC CTGCCACTTT CTTCAATTCA GCCACCTCCT
GAGATTATCA AATCGAAAAT CAATGCGGAA TATCTAGTAG GCATCGGAAA AGTAGGGGGT
AGGCTTCTTA TTCTACTAAA TCTCGCACGA GTACTAGGAG AAGAAGAAAT TGAAGAACTC
AGCGGACTAT CCTCTCCTGA TGAGGACGTT TCAACTGAAT AA
 
Protein sequence
MFEETLDEGS EFSEESLRLV TFELSGEEFG VDIMQVSEVI PVPRITRIPQ APECVKGLIN 
LRGKILVVID LNKRLDFRSK ETDSLSRIII VEVKDTVLGM LVNSVKEVMS LPLSSIQPPP
EIIKSKINAE YLVGIGKVGG RLLILLNLAR VLGEEEIEEL SGLSSPDEDV STE