| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0901 |
|---|
| Symbol | |
|---|
| ID | 3625946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 1087888 |
|---|
| End bp | 1088991 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637699788 |
|---|
| Product | translation factor SUA5 |
|---|
| Protein accession | YP_304455 |
|---|
| Protein GI | 73668440 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0009] Putative translation factor (SUA5) |
|---|
| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAGGCAG AAAACGGAAG TAAAGTAAAG ACTCTGGTTT TTCGGGTTTC CGAAGAAAAT
TTTGATTCTG TCCTTGAAAG AGCGTCAGCG ATTATCAAGC GTGGTGGGAC TGTAGCCTTC
CCCACGGAAA CGGTCTACGG TCTTGGAGCT GACGGCCTGA ACCCCGAGGC AGTTATGAAA
ATTTTTGAGG CAAAAAAGCG CCCTCCTGGA AATCCCCTTA GCCTGCTTGT CCACTCAAGG
GAAGATGTTG AGAAAGTGGC AAGAAATATC CCGGAAAGCG CTTTCAGGCT AATGAATGCT
TTCTGGCCTG GCCCTCTTAC GATTATCCTG GAGAAAAACG ACATTGTTCC CGACATTACT
TCCGGAAGAC TAAAATCAAT AGGAGTCCGC ATGCCTGACC ACAGAGTTCC TCTGGACTTA
ATTAAGAGAG CAGGCACTCC TCTTGCTGCA CCCAGTGCCA ACCTGTCAGG AAAGCCCAGT
CCCAGCCTTG CAGCCCATGT CATCTCAGAT CTTACAGGCA GGATTGATGC AATTCTTGAC
GGAGGGGAGG CTGCCATAGG GCTTGAATCA ACTGTAATTG ATATGACTGT TGAGCCACCT
GTTGTGCTCA GGCCCGGAGC CGTAAGTTTC GAAGAGCTTG AGAGTATTAT AGGAAAGGTT
AGGCCCGGAT ACAAAAATGG CGAAAATGGG GATAAATCGG ATCTGTCGGA AAAGAAGGCA
GGTCAGAAAT ACGGACATTA TATCCCTGAT ACAAAGGTTG TGCTTGTCGA AGGGGAAGGT
AAATCGGTTT CAGGCCAGCT TGTCAAATTA CTTGAAAGTT ACAGAAGCGA AGGGGCGAAA
GTTGGGCTTC TTCTCAGTGA AGAAACCAGT AAGGAGACTG CCCCTCTTCT TGCTTTAAAG
AACCTGAGTC CGGATGAATG CCTTTTGCTG GGGCCCAGAG AAGAGCCGGA CGTGGCTGCC
AGGAAACTCT TTGAAGGGCT CAGAATGCTT GATAAGAAAG GGCTGGATGT AATCGTGGCT
GATGGGTCCT TTAGCCATTC TGGGCTTGGG GAAGCTCTCA TCAACCGACT GAGAGAGGCG
TCCTCTATAA AGATTGTTGC TTAA
|
|---|
| Protein sequence | MQAENGSKVK TLVFRVSEEN FDSVLERASA IIKRGGTVAF PTETVYGLGA DGLNPEAVMK
IFEAKKRPPG NPLSLLVHSR EDVEKVARNI PESAFRLMNA FWPGPLTIIL EKNDIVPDIT
SGRLKSIGVR MPDHRVPLDL IKRAGTPLAA PSANLSGKPS PSLAAHVISD LTGRIDAILD
GGEAAIGLES TVIDMTVEPP VVLRPGAVSF EELESIIGKV RPGYKNGENG DKSDLSEKKA
GQKYGHYIPD TKVVLVEGEG KSVSGQLVKL LESYRSEGAK VGLLLSEETS KETAPLLALK
NLSPDECLLL GPREEPDVAA RKLFEGLRML DKKGLDVIVA DGSFSHSGLG EALINRLREA
SSIKIVA
|
|---|
| |